RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 C1GALT1Q9NS00 363 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 CDK9P50750 372 aaKnown RBP17.04■□□□□ 0.32
SREBF1-204ENST00000395756 RAB28P51157 221 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 SH3BGRP55822 239 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-204ENST00000395756 ISL1P61371 349 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 SELENOWP63302 87 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 TRIM40Q6P9F5 258 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 TTC29Q8NA56 475 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-204ENST00000395756 OR52N2Q8NGI0 321 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 OR8K5Q8NH50 307 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 C7orf34Q96L11 122 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 KCNC2Q96PR1 638 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 DPH7Q9BTV6 452 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 AMBNQ9NP70 447 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 LHX9Q9NQ69 397 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 GMPPBQ9Y5P6 360 aa17.04■□□□□ 0.32
SREBF1-204ENST00000395756 TMEM229AB2RXF0 380 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 H3BQ06 376 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 MATN1P21941 496 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 PPIBP23284 216 aaKnown RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 CXCR2P25025 360 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 CTHP32929 405 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 TMED10P49755 219 aaKnown RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 PRDX1Q06830 199 aaKnown RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 TPRG1LQ5T0D9 272 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 LAIR2Q6ISS4 152 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 RAB42Q8N4Z0 105 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 PJA1Q8NG27 643 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 MRPS30Q9NP92 439 aaKnown RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 RLIMQ9NVW2 624 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 FBXW2Q9UKT8 454 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 CORO2BQ9UQ03 480 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 RBMX2Q9Y388 322 aaKnown RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 NUP210Q8TEM1 1887 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 CAPN5O15484 640 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 NDUFS4O43181 175 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 TNFRSF21O75509 655 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 BCHEP06276 602 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 ACADMP11310 421 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 CLK3P49761 638 aaKnown RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 EMP3P54852 163 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 SPIBQ01892 262 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 CLPPQ16740 277 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 LSRQ86X29 649 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 GAB3Q8WWW8 586 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 TEFMQ96QE5 360 aaKnown RBP17.03■□□□□ 0.32
SREBF1-204ENST00000395756 LMAN2LQ9H0V9 348 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 USE1Q9NZ43 259 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 NDUFAF4Q9P032 175 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 TBC1D29Q9UFV1 150 aa17.03■□□□□ 0.32
SREBF1-204ENST00000395756 ERI3O43414 337 aaKnown RBP17.02■□□□□ 0.32
SREBF1-204ENST00000395756 ATE1O95260 518 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 DDCP20711 480 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 FPR1P21462 350 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 PDE7AQ13946 482 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 LRRC32Q14392 662 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 DUSP7Q16829 419 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 ZNF542PQ5EBM4 170 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 CCDC81Q6ZN84 652 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 UBE3DQ7Z6J8 389 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 ANKRA2Q9H9E1 313 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 A0A1W2PPW3 197 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 PRAMEF25A6NGN4 478 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 TNFRSF11BO00300 401 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 PRAMEF10O60809 474 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 VIPP01282 170 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 GPC1P35052 558 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 PCGF2P35227 344 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 ENPP2Q13822 863 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 ARHGAP19Q14CB8 494 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 HEPACAMQ14CZ8 416 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 BROXQ5VW32 411 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 TSEN54Q7Z6J9 526 aaKnown RBP17.02■□□□□ 0.32
SREBF1-204ENST00000395756 HORMAD2Q8N7B1 307 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 ABHD11Q8NFV4 315 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 FEVQ99581 238 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 S1PR5Q9H228 398 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 TRPV5Q9NQA5 729 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 TUBA8Q9NY65 449 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-204ENST00000395756 PIAS3Q9Y6X2 628 aa17.02■□□□□ 0.32
SREBF1-204ENST00000395756 A0A1W2PS29 197 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 HAT1O14929 419 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 PDPK1O15530 556 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 PLRG1O43660 514 aaKnown RBP17.02■□□□□ 0.31
SREBF1-204ENST00000395756 BCL6P41182 706 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 CDK5R2Q13319 367 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 UAP1L1Q3KQV9 507 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 ZNF773Q6PK81 442 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 PGBD3Q8N328 593 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 OR5D16Q8NGK9 328 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 RGMAQ96B86 450 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 LHPPQ9H008 270 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 SYNPO2LQ9H987 977 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 PAK1IP1Q9NWT1 392 aaPredicted RBP17.02■□□□□ 0.31
SREBF1-204ENST00000395756 MAPRE3Q9UPY8 281 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 ICKQ9UPZ9 632 aa17.02■□□□□ 0.31
SREBF1-204ENST00000395756 ANGPTL1O95841 491 aa17.01■□□□□ 0.31
SREBF1-204ENST00000395756 PCSK2P16519 638 aa17.01■□□□□ 0.31
SREBF1-204ENST00000395756 IL1RNP18510 177 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms