RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 LIMK1P53667 647 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 AMZ1Q400G9 498 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 FAM98BQ52LJ0 330 aaKnown RBP14.36□□□□□ -0.11
SCAF11-204ENST00000395454 PERM1Q5SV97 790 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 ANKRD26P1Q6NSI1 321 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 ERICH5Q6P6B1 374 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 UGT2A3Q6UWM9 527 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 CREB3L4Q8TEY5 395 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 RSC1A1Q92681 617 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 PRAP1Q96NZ9 151 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 CIB1Q99828 191 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 CCDC3Q9BQI4 270 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 CHID1Q9BWS9 393 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 OSBPL11Q9BXB4 747 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 UGT2B28Q9BY64 529 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 LHX9Q9NQ69 397 aa14.36□□□□□ -0.11
SCAF11-204ENST00000395454 ZNF282Q9UDV7 671 aaPredicted RBP14.36□□□□□ -0.11
SCAF11-204ENST00000395454 GSAPA4D1B5 854 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 A6NHS1 94 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ZW10O43264 779 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 SH3BGRLO75368 114 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CREG1O75629 220 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 KCNK5O95279 499 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 PNLIPP16233 465 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 PEBP1P30086 187 aaKnown RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 RBBP5Q15291 538 aaKnown RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 MPEG1Q2M385 716 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 NKAIN2Q5VXU1 208 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 OOSP2Q86WS3 158 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 EID3Q8N140 333 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 BAHD1Q8TBE0 780 aaPredicted RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 NETO1Q8TDF5 533 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ZFP90Q8TF47 636 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 FIG4Q92562 907 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CDC6Q99741 560 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 C9orf16Q9BUW7 83 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 SYNDIG1Q9H7V2 258 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 YY1AP1Q9H869 796 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 TPT1P8Q9HAU6 139 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 TMEM184CQ9NVA4 438 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 HRASLS2Q9NWW9 162 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 MDC1Q14676 2089 aaKnown RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 BTN3A3O00478 584 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 GSTA4O15217 222 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CAPN5O15484 640 aaPredicted RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CCNDBP1O95273 360 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 RASAL1O95294 804 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 LDLRP01130 860 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 KLK1P06870 262 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 PROS1P07225 676 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CHRM5P08912 532 aaPredicted RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 POLR2CP19387 275 aaPredicted RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ACP1P24666 158 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 AHRP35869 848 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CAPZBP47756 277 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 EPHA4P54764 986 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 TAS2R50P59544 299 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 TXNL4AP83876 142 aaKnown RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 GAB1Q13480 694 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 VEZF1Q14119 521 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 NR1D2Q14995 579 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 PDK3Q15120 406 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ZIC1Q15915 447 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ADRM1Q16186 407 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ADPRMQ3LIE5 342 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CCDC157Q569K6 752 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ZNF425Q6IV72 752 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 KLHL35Q6PF15 583 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 PAGE2Q7Z2X7 111 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 PTOV1Q86YD1 416 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CHERPQ8IWX8 916 aaKnown RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 ZZZ3Q8IYH5 903 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 NATD1Q8N6N6 113 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 FAM86B1Q8N7N1 296 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 DEFB124Q8NES8 71 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 OR2L3Q8NG85 312 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CDC26Q8NHZ8 85 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 PPCDCQ96CD2 204 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 QRFPRQ96P65 431 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CENPKQ9BS16 269 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 TBCDQ9BTW9 1192 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 DDX31Q9H8H2 851 aaKnown RBP14.35□□□□□ -0.11
SCAF11-204ENST00000395454 SLC6A20Q9NP91 592 aa14.35□□□□□ -0.11
SCAF11-204ENST00000395454 CNOT1A5YKK6 2376 aaKnown RBP14.34□□□□□ -0.11
SCAF11-204ENST00000395454 IGHV1OR21-1A0A087WYE8 117 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 FAM221BA6H8Z2 402 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 OR5K3A6NET4 321 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 UPK1AO00322 258 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 SAP18O00422 153 aaKnown RBP14.34□□□□□ -0.11
SCAF11-204ENST00000395454 DLGAP1O14490 977 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 SOCS2O14508 198 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 B4GAT1O43505 415 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 TNFSF14O43557 240 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 DUX1O43812 170 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 SMNDC1O75940 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCAF11-204ENST00000395454 MAGEA2P43356 314 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 MVDP53602 400 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms