RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 WDR48Q8TAF3 677 aa17.52■□□□□ 0.4
PCDHA1-202ENST00000394633 FAM83CQ9BQN1 747 aa17.52■□□□□ 0.4
PCDHA1-202ENST00000394633 TAPBPLQ9BX59 468 aa17.52■□□□□ 0.4
PCDHA1-202ENST00000394633 RHCGQ9UBD6 479 aa17.52■□□□□ 0.4
PCDHA1-202ENST00000394633 CFL2Q9Y281 166 aa17.52■□□□□ 0.4
PCDHA1-202ENST00000394633 ENPP4Q9Y6X5 453 aa17.52■□□□□ 0.4
PCDHA1-202ENST00000394633 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.4
PCDHA1-202ENST00000394633 SLC5A10A0PJK1 596 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 LOC110117498-PIK3R3F6TDL0 507 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 SAP18O00422 153 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 KLHL18O94889 574 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 GASTP01350 101 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF30P17039 623 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 CCR2P41597 374 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 DGKEP52429 567 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 PCBP3P57721 371 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 DEFA1P59665 94 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 DEFA3P59666 94 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 DCDC1P59894 354 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 POLR2LP62875 67 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 C2orf80Q0P641 193 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 PDE7AQ13946 482 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 HENMT1Q5T8I9 393 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 TRIM40Q6P9F5 258 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 PTCHD4Q6ZW05 846 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 WDR36Q8NI36 951 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 PIK3R3Q92569 461 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 MRPS31Q92665 395 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 PPCDCQ96CD2 204 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 SMG9Q9H0W8 520 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 NMNAT1Q9HAN9 279 aaPredicted RBP17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 MAFFQ9ULX9 164 aa17.52■□□□□ 0.39
PCDHA1-202ENST00000394633 NOTCH4Q99466 2003 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 CXorf51AA0A1B0GTR3 108 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 A0A1W2PRU2 124 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 ARAFP10398 606 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 PDHA2P29803 388 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 CHI3L1P36222 383 aaPredicted RBP17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 SLC15A1P46059 708 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 CRISP1P54107 249 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF630Q2M218 657 aaPredicted RBP17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 TIMM50Q3ZCQ8 353 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 IER5LQ5T953 404 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 PLAG1Q6DJT9 500 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 FRMPD2BQ6IN97 320 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 TRAM1L1Q8N609 369 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 C16orf78Q8WTQ4 265 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 MYLIPQ8WY64 445 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF486Q96H40 463 aaPredicted RBP17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 C14orf119Q9NWQ9 140 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 CLN6Q9NWW5 311 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 ERVK13-1Q9NX77 482 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 KCNE2Q9Y6J6 123 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 KIAA1549LQ6ZVL6 1849 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 TRBC2A0A5B9 178 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 FAM227AF5H4B4 570 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 LEFTY2O00292 366 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 TGFB1P01137 390 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 CYP2A6P11509 494 aaPredicted RBP17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 LMNTD1Q8N9Z9 388 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 OR2A12Q8NGT7 310 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 CAPSLQ8WWF8 208 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 OPALINQ96PE5 141 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 VPS35Q96QK1 796 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 WRAP53Q9BUR4 548 aaKnown RBP17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 YIPF2Q9BWQ6 316 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 OR51B5Q9H339 312 aa17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 MOV10Q9HCE1 1003 aaKnown RBP17.51■□□□□ 0.39
PCDHA1-202ENST00000394633 RHCEP18577 417 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 PBLDP30039 288 aaPredicted RBP17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 SLBPQ14493 270 aaKnown RBP eCLIP17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF697Q5TEC3 545 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 FAM71E1Q6IPT2 247 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF770Q6IQ21 691 aaPredicted RBP17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 CCDC149Q6ZUS6 474 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 ADGRD2Q7Z7M1 963 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 SLC44A2Q8IWA5 706 aaPredicted RBP17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 BTN2A2Q8WVV5 523 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 TIFAQ96CG3 184 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 TRNT1Q96Q11 434 aaKnown RBP17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 SLX1AQ9BQ83 275 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 SLC30A2Q9BRI3 323 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 PBX4Q9BYU1 374 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 NEK6Q9HC98 313 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 DMRT3Q9NQL9 472 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 TAS2R9Q9NYW1 312 aa17.5■□□□□ 0.39
PCDHA1-202ENST00000394633 A0A075B6Q4 140 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 H3BQ06 376 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 MPZL2O60487 215 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 ATG13O75143 517 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 IFNA14P01570 189 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 APOA1P02647 267 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 SRPRAP08240 638 aaKnown RBP17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 POLR2EP19388 210 aaKnown RBP17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 POU1F1P28069 291 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 TNFSF8P32971 234 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 SOAT1P35610 550 aa17.49■□□□□ 0.39
PCDHA1-202ENST00000394633 PRLHRP49683 370 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms