RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ASPNQ9BXN1 380 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 MTG2Q9H4K7 406 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 C8orf33Q9H7E9 229 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 SYNDIG1Q9H7V2 258 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SMURF1Q9HCE7 757 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 AKIP1Q9NQ31 210 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 IFT46Q9NQC8 304 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NLKQ9UBE8 527 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RAB23Q9ULC3 237 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RFXAPO00287 272 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 KIAA0513O60268 411 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TOXO94900 526 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 RASGRP1O95267 797 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 KLF8O95600 359 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 MPC1LP0DKB6 136 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 JUNBP17275 347 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 AMD1P17707 334 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 DNASE1P24855 282 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 NTSR1P30989 418 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 HTR3AP46098 478 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 DGKQP52824 942 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ATP12AP54707 1039 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ZNF234Q14588 700 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 UBXN2BQ14CS0 331 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 UAP1L1Q3KQV9 507 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PYHIN1Q6K0P9 492 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 RPS27LQ71UM5 84 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 GDPD3Q7L5L3 318 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 LRRC70Q7Z2Q7 622 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 MAVSQ7Z434 540 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 KCTD20Q7Z5Y7 419 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 MFSD6LQ8IWD5 586 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ADGRG5Q8IZF4 528 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PNPLA1Q8N8W4 532 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CHDHQ8NE62 594 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 RNASE11Q8TAA1 199 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 SETD6Q8TBK2 473 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 BTN2A2Q8WVV5 523 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 HMGB4Q8WW32 186 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SLC5A11Q8WWX8 675 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ASB15Q8WXK1 588 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 MUL1Q969V5 352 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 APOLD1Q96LR9 279 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 OR52E6Q96RD3 313 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 WDR83Q9BRX9 315 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 WACQ9BTA9 647 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 BTBD1Q9H0C5 482 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PCBD2Q9H0N5 130 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 MCCC2Q9HCC0 563 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 KLHL1Q9NR64 748 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 IGSF5Q9NSI5 407 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 B3GNT2Q9NY97 397 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 H2AFY2Q9P0M6 372 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 KLHL42Q9P2K6 505 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 GIMAP2Q9UG22 337 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CDV3Q9UKY7 258 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 ZNF236Q9UL36 1845 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 A0A0U1RQS6 177 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 G3V2L1 256 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 L7N2F9 121 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CXCR6O00574 342 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 GRID2O43424 1007 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 GABARAPO95166 117 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SCELO95171 688 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CCNDBP1O95273 360 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PAK4O96013 591 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 NR2F6P10588 404 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PRPS2P11908 318 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ANXA3P12429 323 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TIMP2P16035 220 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ZNF10P21506 573 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 C5AR1P21730 350 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ILF3Q12906 894 aaKnown RBP eCLIP5.46□□□□□ -1.54
RFFL-202ENST00000394597 SP140Q13342 867 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TUBB3Q13509 450 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ELOAQ14241 798 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 SF1Q15637 639 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 C9orf50Q5SZB4 431 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TANGO2Q6ICL3 276 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ENPP7Q6UWV6 458 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CREB3L2Q70SY1 520 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 GPR149Q86SP6 731 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PIANPQ8IYJ0 282 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 GDPD1Q8N9F7 314 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 LILRB1Q8NHL6 650 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 WFDC5Q8TCV5 224 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ANKRD49Q8WVL7 239 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SLC7A6Q92536 515 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TCEAL3Q969E4 200 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PYCR2Q96C36 320 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 MYEOVQ96EZ4 313 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SHDQ96IW2 340 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ITCHQ96J02 903 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CDK15Q96Q40 435 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SMIM14Q96QK8 99 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CD244Q9BZW8 370 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PDFQ9HBH1 243 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 C1orf109Q9NX04 203 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SAMD4AQ9UPU9 718 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 MAGED1Q9Y5V3 778 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms