RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TAAR2Q9P1P5 351 aa12.87□□□□□ -0.35
GTF2F1-201ENST00000394456 KIAA1549LQ6ZVL6 1849 aa12.87□□□□□ -0.35
GTF2F1-201ENST00000394456 CLCA1A8K7I4 914 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 PPM1DO15297 605 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 SSX4O60224 188 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 MMP20O60882 483 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 B4GALT2O60909 372 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 PSMB5P28074 263 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 EIF2DP41214 584 aaKnown RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 CTSKP43235 329 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 LIM2P55344 173 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 PLEKHG7Q6ZR37 379 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 ADGRF3Q8IZF5 1079 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 OR5AR1Q8NGP9 310 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 ATL1Q8WXF7 558 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 CDADC1Q9BWV3 514 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 C11orf16Q9NQ32 467 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 ZNF282Q9UDV7 671 aaPredicted RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 RBMX2Q9Y388 322 aaKnown RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 TRPM6Q9BX84 2022 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 MUC22E2RYF6 1773 aaPredicted RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 METTL15A6NJ78 407 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 PRNPP04156 253 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 PTGES3Q15185 160 aaKnown RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 ARMCX4Q5H9R4 360 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 TANGO2Q6ICL3 276 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 FAM71E1Q6IPT2 247 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 MEX3DQ86XN8 651 aaKnown RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 MMAAQ8IVH4 418 aaKnown RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 LRRC56Q8IYG6 542 aaPredicted RBP12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 AQP11Q8NBQ7 271 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 OR52N2Q8NGI0 321 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 TIFAQ96CG3 184 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 DTD2Q96FN9 168 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 CCNB1IP1Q9NPC3 277 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
GTF2F1-201ENST00000394456 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 GPR37L1O60883 481 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 TGM4P49221 684 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 SEC23BQ15437 767 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 STEAP3Q658P3 488 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 SLC46A3Q7Z3Q1 461 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 COMTD1Q86VU5 262 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 STX19Q8N4C7 294 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 AMER3Q8N944 861 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 IPCEF1Q8WWN9 437 aaPredicted RBP12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 S100ZQ8WXG8 99 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 OR8D1Q8WZ84 308 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 FAM83CQ9BQN1 747 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 CUEDC1Q9NWM3 386 aaPredicted RBP12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 GIN1Q9NXP7 522 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 ZNF229Q9UJW7 825 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 A0A1W2PRB8 838 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 FEZF1A0PJY2 475 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 CLDN24A6NM45 220 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 CKMT1AP12532 417 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 HSD3B1P14060 373 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 HSD3B2P26439 372 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 CNR2P34972 360 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 XCR1P46094 333 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 ALDH9A1P49189 494 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 ERVK-21P61565 698 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 LRRC74AQ0VAA2 488 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 FADDQ13158 208 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 SHHQ15465 462 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 ZNF404Q494X3 552 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 RAET1GQ6H3X3 334 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 ZNF605Q86T29 641 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 LYSMD2Q8IV50 215 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 FAM20CQ8IXL6 584 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 HORMAD2Q8N7B1 307 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 PLA2G15Q8NCC3 412 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 OR4D11Q8NGI4 311 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 COQ10AQ96MF6 247 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 FOPNLQ96NB1 174 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 VPS35Q96QK1 796 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 F2RL3Q96RI0 385 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 FKBP14Q9NWM8 211 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 NFKBIL1Q9UBC1 381 aaPredicted RBP12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 COL4A3Q01955 1670 aa12.85□□□□□ -0.35
GTF2F1-201ENST00000394456 EDDM13A0A1B0GTR0 161 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 TMEM221A6NGB7 291 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 ADAMDEC1O15204 470 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 C6P13671 934 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 ITGB7P26010 798 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 ELP6Q0PNE2 266 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 DUSP6Q16828 381 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 CYP4Z2PQ8N1L4 340 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 VANGL1Q8TAA9 524 aaPredicted RBP12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 SLC5A11Q8WWX8 675 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 SFXN1Q9H9B4 322 aa12.84□□□□□ -0.35
GTF2F1-201ENST00000394456 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms