RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CLEC18BQ6UXF7 455 aa28.73■■■□□ 2.19
CMTM4-202ENST00000394106 RPS19BP1Q86WX3 136 aaKnown RBP28.73■■■□□ 2.19
CMTM4-202ENST00000394106 CLEC18CQ8NCF0 446 aa28.73■■■□□ 2.19
CMTM4-202ENST00000394106 B3GNT7Q8NFL0 401 aa28.73■■■□□ 2.19
CMTM4-202ENST00000394106 NTMT1Q9BV86 223 aa28.73■■■□□ 2.19
CMTM4-202ENST00000394106 ADAP2Q9NPF8 381 aa28.73■■■□□ 2.19
CMTM4-202ENST00000394106 RP1L1Q8IWN7 2480 aaPredicted RBP28.72■■■□□ 2.19
CMTM4-202ENST00000394106 ANKUB1A6NFN9 424 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 LDB3O75112 727 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 PYGBP11216 843 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 TSPAN8P19075 237 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 CDH13P55290 713 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 ELOAQ14241 798 aaKnown RBP28.72■■■□□ 2.19
CMTM4-202ENST00000394106 TERF2Q15554 542 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 MILR1Q7Z6M3 343 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 LCA5Q86VQ0 697 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 ZNF483Q8TF39 744 aaPredicted RBP28.72■■■□□ 2.19
CMTM4-202ENST00000394106 FAR1Q8WVX9 515 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 ALOXE3Q9BYJ1 711 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 DEFB126Q9BYW3 111 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 ESPL1Q14674 2120 aa28.72■■■□□ 2.19
CMTM4-202ENST00000394106 TRBV11-1A0A0K0K1C0 115 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 ETHE1O95571 254 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 CD96P40200 585 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 SLCO1A2P46721 670 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 ID2Q02363 134 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 OC90Q02509 493 aaPredicted RBP28.71■■■□□ 2.19
CMTM4-202ENST00000394106 LGI4Q8N135 537 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 BCORP1Q8N888 145 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 APCDD1LQ8NCL9 501 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 OR4F6Q8NGB9 312 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 ACMSDQ8TDX5 336 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 MZB1Q8WU39 189 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 SIGLEC12Q96PQ1 595 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 TAAR6Q96RI8 345 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 ANKZF1Q9H8Y5 726 aa28.71■■■□□ 2.19
CMTM4-202ENST00000394106 SMIM23A6NLE4 172 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 FOXE1O00358 373 aaPredicted RBP28.7■■■□□ 2.18
CMTM4-202ENST00000394106 AGFG2O95081 481 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 TPP2P29144 1249 aaPredicted RBP28.7■■■□□ 2.18
CMTM4-202ENST00000394106 CLCN2P51788 898 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 CUL3Q13618 768 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 OR1C1Q15619 314 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 ELAVL1Q15717 326 aaKnown RBP28.7■■■□□ 2.18
CMTM4-202ENST00000394106 INAQ16352 499 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 SGO1Q5FBB7 561 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 ZNF766Q5HY98 468 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 FRG2Q64ET8 278 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 GPR180Q86V85 440 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 THAP3Q8WTV1 239 aaPredicted RBP28.7■■■□□ 2.18
CMTM4-202ENST00000394106 NCLNQ969V3 563 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 FRG2BQ96QU4 278 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 OLAHQ9NV23 265 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 CLCA3PQ9Y6N3 262 aa28.7■■■□□ 2.18
CMTM4-202ENST00000394106 A0A1B0GTL3 188 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 A0A1W2PPM1 405 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 BLACEA4D250 179 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 SYNDIG1LA6NDD5 238 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 FOXO6A8MYZ6 492 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 PPP6CO00743 305 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 EEDO75530 441 aaKnown RBP28.69■■■□□ 2.18
CMTM4-202ENST00000394106 OTCP00480 354 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 HERVK_113P63132 956 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 IFT88Q13099 833 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 TMEM132CQ8N3T6 1108 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 ZCCHC7Q8N3Z6 543 aaKnown RBP28.69■■■□□ 2.18
CMTM4-202ENST00000394106 VMP1Q96GC9 406 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 SERPINI1Q99574 410 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 C1QTNF3Q9BXJ4 246 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 ERVK-6Q9BXR3 956 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 ZNF717Q9BY31 904 aaPredicted RBP28.69■■■□□ 2.18
CMTM4-202ENST00000394106 MS4A12Q9NXJ0 267 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 PSD3Q9NYI0 1048 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 PHF11Q9UIL8 331 aa28.69■■■□□ 2.18
CMTM4-202ENST00000394106 DLX3O60479 287 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 RASAL1O95294 804 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 TNNI3P19429 210 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 BSGP35613 385 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 ARFIP1P53367 373 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 HNRNPH2P55795 449 aaKnown RBP28.68■■■□□ 2.18
CMTM4-202ENST00000394106 MLF1P58340 268 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 SERTAD2Q14140 314 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 SPINK14Q6IE38 97 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 CYP20A1Q6UW02 462 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 CNPY4Q8N129 248 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 ST6GALNAC3Q8NDV1 305 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 MDS2Q8NDY4 140 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 TRPC4APQ8TEL6 797 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.68■■■□□ 2.18
CMTM4-202ENST00000394106 ANKRD9Q96BM1 317 aaPredicted RBP28.68■■■□□ 2.18
CMTM4-202ENST00000394106 ELOVL6Q9H5J4 265 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 KLHL1Q9NR64 748 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 VTI1BQ9UEU0 232 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 ATG4BQ9Y4P1 393 aa28.68■■■□□ 2.18
CMTM4-202ENST00000394106 SUPT7LO94864 414 aa28.67■■■□□ 2.18
CMTM4-202ENST00000394106 GSTA1P08263 222 aa28.67■■■□□ 2.18
CMTM4-202ENST00000394106 TNFRSF17Q02223 184 aa28.67■■■□□ 2.18
CMTM4-202ENST00000394106 GGTA1PQ4G0N0 100 aa28.67■■■□□ 2.18
CMTM4-202ENST00000394106 C18orf63Q68DL7 685 aa28.67■■■□□ 2.18
CMTM4-202ENST00000394106 LETMD1Q6P1Q0 360 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms