RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PNPLA2Q96AD5 504 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 RGMAQ96B86 450 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 REPS1Q96D71 796 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 FRG2BQ96QU4 278 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 LPAR4Q99677 370 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 TBCDQ9BTW9 1192 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 NTMT1Q9BV86 223 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 C1QTNF3Q9BXJ4 246 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 MRPL1Q9BYD6 325 aaKnown RBP7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SHCBP1LQ9BZQ2 653 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 GSTO2Q9H4Y5 243 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 ELOVL6Q9H5J4 265 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 EPS8L2Q9H6S3 715 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 LIN28AQ9H9Z2 209 aaKnown RBP7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 KCNK13Q9HB14 408 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 MMP25Q9NPA2 562 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLAMF7Q9NQ25 335 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 C5AR2Q9P296 337 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 DCDC2Q9UHG0 476 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 B3GNT3Q9Y2A9 372 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 NTNG1Q9Y2I2 539 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 ATG4BQ9Y4P1 393 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 MED13Q9UHV7 2174 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 A0A0A6YYD5 115 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 A0A1W2PS29 197 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 MANBAO00462 879 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 UBFD1O14562 309 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 PCDH17O14917 1159 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 FGF17O60258 216 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 WISP1O95388 367 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 AIFM1O95831 613 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 IFNA16P05015 189 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 KLK1P06870 262 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 CYC1P08574 325 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 IMPDH1P20839 514 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 PTX3P26022 381 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 HPDP32754 393 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 FOXA1P55317 472 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 PHEXP78562 749 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TNFRSF17Q02223 184 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC18A2Q05940 514 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 IFT88Q13099 833 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 INPP5JQ15735 1006 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 GGTA1PQ4G0N0 100 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 METTL2BQ6P1Q9 378 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 CYP20A1Q6UW02 462 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 C16orf47Q6ZP98 133 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 DGAT2L6Q6ZPD8 337 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 GPRIN3Q6ZVF9 776 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TRABD2AQ86V40 505 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 LCA5Q86VQ0 697 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 NUDT13Q86X67 352 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC22A9Q8IVM8 553 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 C10orf107Q8IVU9 208 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SRRM1Q8IYB3 904 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF595Q8IYB9 648 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 MMP21Q8N119 569 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF321PQ8N8H1 164 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SRFBP1Q8NEF9 429 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ARMC2Q8NEN0 867 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 NFAM1Q8NET5 270 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 M1APQ8TC57 530 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 THAP3Q8WTV1 239 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SELENOMQ8WWX9 145 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TM9SF4Q92544 642 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 NCLNQ969V3 563 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 RNF166Q96A37 237 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 MIB2Q96AX9 1013 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ANKRD9Q96BM1 317 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 PPWD1Q96BP3 646 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SNRNP40Q96DI7 357 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 L3HYPDHQ96EM0 354 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 APOPT1Q96IL0 206 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF382Q96SR6 550 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 KCNK17Q96T54 332 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 CENPKQ9BS16 269 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 HES7Q9BYE0 225 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 PPCSQ9HAB8 311 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 CLK4Q9HAZ1 481 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 LYRM4Q9HD34 91 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TNFRSF12AQ9NP84 129 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 MID1IP1Q9NPA3 183 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TEX10Q9NXF1 929 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC17A7Q9P2U7 560 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TRPS1Q9UHF7 1281 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 LGALS13Q9UHV8 139 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ADGRE2Q9UHX3 823 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF223Q9UK11 482 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 RAB21Q9UL25 225 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC12A4Q9UP95 1085 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 MRPS33Q9Y291 106 aaKnown RBP7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TSC22D4Q9Y3Q8 395 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 MMACHCQ9Y4U1 282 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 ASB4Q9Y574 426 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 TIMM22Q9Y584 194 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 PCDHGA10Q9Y5H3 936 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 SEC16AO15027 2179 aa7.17□□□□□ -1.26
HMGB3P1-201ENST00000393368 UBR5O95071 2799 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 TRBV11-1A0A0K0K1C0 115 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 A0A1W2PR48 441 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms