RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SNTB2Q13425 540 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SMAD4Q13485 552 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CAPSQ13938 189 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TDRD10Q5VZ19 366 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 HIST2H2AA3Q6FI13 130 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 H3F3CQ6NXT2 135 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CDC73Q6P1J9 531 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 LCLAT1Q6UWP7 414 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GSG1LQ6UXU4 331 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GALNT10Q86SR1 603 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 FAM131BQ86XD5 332 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 DAW1Q8N136 415 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF561Q8N587 486 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 KDF1Q8NAX2 398 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 OR2L5Q8NG80 312 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PCDH19Q8TAB3 1148 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 KIAA1191Q96A73 305 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 HIST1H2AHQ96KK5 128 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 FCRL3Q96P31 734 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 DDOQ99489 341 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 HIST1H2AJQ99878 128 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ABHD16BQ9H3Z7 469 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PRDM12Q9H4Q4 367 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 NMUR1Q9HB89 426 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 RGS18Q9NS28 235 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 FAM86C1Q9NVL1 165 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ASF1BQ9NVP2 202 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ABCA3Q99758 1704 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 COL22A1Q8NFW1 1626 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GSAPA4D1B5 854 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SLC10A3P09131 477 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CLTBP09497 229 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CBSLP0DN79 551 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CBSP35520 551 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 FEN1P39748 380 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SOX3P41225 446 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 RPL38P63173 70 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CLINT1Q14677 625 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 MAJINQ3KP22 176 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CDNFQ49AH0 187 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PAGE3Q5JUK9 113 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ANKRD34AQ69YU3 496 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CLEC9AQ6UXN8 241 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TRMT11Q7Z4G4 463 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 LHFPL3Q86UP9 236 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 MARCH9Q86YJ5 346 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 DNASE1L2Q92874 299 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GTPBP3Q969Y2 492 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ISL2Q96A47 359 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 RAB3CQ96E17 227 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TRMT61AQ96FX7 289 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TRMT2BQ96GJ1 504 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PIGQQ9BRB3 760 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM185BQ9H7F4 350 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GHRLQ9UBU3 117 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 AAR2Q9Y312 384 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PCDHGA2Q9Y5H1 932 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 A0A1B0GTQ1 180 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 FAM221BA6H8Z2 402 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SOWAHBA6NEL2 793 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 B4GALT5O43286 388 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ANXA9O76027 345 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 IFNA10P01566 189 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 LCP1P13796 627 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ANXA8P13928 327 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PPP3CBP16298 524 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PFKLP17858 780 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 S100A11P31949 105 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 VIPR1P32241 457 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TNFSF9P41273 254 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 DNAJB13P59910 316 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TFAP2EQ6VUC0 442 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 OVCH2Q7RTZ1 564 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CMIPQ8IY22 773 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 STK40Q8N2I9 435 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ARFGAP1Q8N6T3 406 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 BVESQ8NE79 360 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GGHQ92820 318 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 FATE1Q969F0 183 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CNTNAP3BQ96NU0 1288 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SORCS2Q96PQ0 1159 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CGRRF1Q99675 332 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 MAP3K3Q99759 626 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SAP130Q9H0E3 1048 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 EVA1AQ9H8M9 152 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 RAD18Q9NS91 495 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 WASF3Q9UPY6 502 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 NRCAMQ92823 1304 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ABCD4O14678 606 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF197O14709 1029 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 HRO43593 1189 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 IFNA17P01571 189 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RB1P06400 928 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ODC1P11926 461 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM11P17152 192 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ASPAP45381 313 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CLCN5P51795 746 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RIDAP52758 137 aaKnown RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RAB8AP61006 207 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms