RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SLAMF1Q13291 335 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF273Q14593 569 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 LTB4RQ15722 352 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 SYVN1Q86TM6 617 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 SYTL1Q8IYJ3 562 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 KCT2Q8NC54 265 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 AKAP1Q92667 903 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC50-202ENST00000392456 C1QTNF2Q9BXJ5 285 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 SLC2A4RGQ9NR83 387 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 KIF17Q9P2E2 1029 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 COPG1Q9Y678 874 aaKnown RBP18.16■□□□□ 0.5
CCDC50-202ENST00000392456 TCRBV21S2A2A0A5A6 115 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 CIB4A0PJX0 185 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 PRORSD1PA6NEY8 169 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF99A8MXY4 864 aaPredicted RBP18.15■□□□□ 0.5
CCDC50-202ENST00000392456 F8W036 122 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 SDHDO14521 159 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF45Q02386 682 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 CCSMST1Q4G0I0 132 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 ADAMTSL4Q6UY14 1074 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 GPAT4Q86UL3 456 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 RAB43Q86YS6 212 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 CFAP206Q8IYR0 622 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 TEX47Q8TBZ9 253 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 UFD1Q92890 307 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 CENPNQ96H22 339 aaPredicted RBP18.15■□□□□ 0.5
CCDC50-202ENST00000392456 HDHD5Q9BXW7 423 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF224Q9NZL3 707 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 SLC23A2Q9UGH3 650 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 OR6C65A6NJZ3 312 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 GFYI3L273 518 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 SLC31A1O15431 190 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 NDUFS6O75380 124 aaKnown RBP18.15■□□□□ 0.5
CCDC50-202ENST00000392456 TNNI3P19429 210 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 F8A1P23610 371 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 HOXA1P49639 335 aaPredicted RBP18.15■□□□□ 0.5
CCDC50-202ENST00000392456 GZMKP49863 264 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 GABARAPL2P60520 117 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 NCS1P62166 190 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 BCL7AQ4VC05 210 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 TBCELQ5QJ74 424 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 TRMT11Q7Z4G4 463 aaKnown RBP18.15■□□□□ 0.5
CCDC50-202ENST00000392456 PARP16Q8N5Y8 322 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 STON2Q8WXE9 905 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 AHCYL2Q96HN2 611 aaKnown RBP18.15■□□□□ 0.5
CCDC50-202ENST00000392456 SLC12A9Q9BXP2 914 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 SLC17A9Q9BYT1 436 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 ASPSCR1Q9BZE9 553 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 ABCG4Q9H172 646 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 MMP27Q9H306 513 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 TUBB1Q9H4B7 451 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 VTI1BQ9UEU0 232 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 CD300AQ9UGN4 299 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 COPS3Q9UNS2 423 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 USP22Q9UPT9 525 aa18.15■□□□□ 0.5
CCDC50-202ENST00000392456 TRAV20A0A0B4J274 112 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 MEIOCA2RUB1 952 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 OR6C70A6NIJ9 312 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 KPNA5O15131 536 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 POP7O75817 140 aaKnown RBP18.14■□□□□ 0.5
CCDC50-202ENST00000392456 GABRG2P18507 467 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 RPS21P63220 83 aaKnown RBP18.14■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF124Q15973 351 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 FAM83HQ6ZRV2 1179 aaPredicted RBP18.14■□□□□ 0.5
CCDC50-202ENST00000392456 DDIASQ8IXT1 998 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 HMGB4Q8WW32 186 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 ST8SIA4Q92187 359 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 PDXPQ96GD0 296 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 FOPNLQ96NB1 174 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 ARL15Q9NXU5 204 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 GIMAP2Q9UG22 337 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 MMP17Q9ULZ9 603 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 HRH3Q9Y5N1 445 aa18.14■□□□□ 0.5
CCDC50-202ENST00000392456 LOC730098B7Z3J9 87 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 OR7A17O14581 309 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 RGS5O15539 181 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 OR2B3O76000 313 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 SNX4O95219 450 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 ZNF3P17036 446 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 ERVPABLB-1P60509 514 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 PIGFQ07326 219 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 BTN1A1Q13410 526 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 GAS6Q14393 721 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 PCBP2Q15366 365 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCDC50-202ENST00000392456 BTBD16Q32M84 506 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 SYTL3Q4VX76 610 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.14■□□□□ 0.49
CCDC50-202ENST00000392456 GOLGA7Q7Z5G4 137 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 OR8K5Q8NH50 307 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 TMEM159Q96B96 161 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 PYCR2Q96C36 320 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 YIPF6Q96EC8 236 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 SLC45A3Q96JT2 553 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 ING2Q9H160 280 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 RDH14Q9HBH5 336 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 SNX6Q9UNH7 406 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 CA5BQ9Y2D0 317 aa18.14■□□□□ 0.49
CCDC50-202ENST00000392456 AZIN1O14977 448 aa18.13■□□□□ 0.49
CCDC50-202ENST00000392456 MATN4O95460 622 aa18.13■□□□□ 0.49
CCDC50-202ENST00000392456 POU2F1P14859 743 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms