RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SPAG17Q6Q759 2223 aa10.86□□□□□ -0.67
SMARCAL1-203ENST00000392128 CCDC163A0A0D9SF12 145 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 A0A1W2PR48 441 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 CLOCKO15516 846 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 P2RX6O15547 441 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 AQP9O43315 295 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 DEAF1O75398 565 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 PRSS23O95084 383 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 NUDT7P0C024 238 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZNF888P0CJ79 500 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 CKMT2P17540 419 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 KDELR2P33947 212 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 CHI3L1P36222 383 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 CRATP43155 626 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 FOLH1Q04609 750 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 DMWDQ09019 674 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 RBBP4Q09028 425 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 WDR45BQ5MNZ6 344 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 COX20Q5RI15 118 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 TMTC4Q5T4D3 741 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 ARMC6Q6NXE6 501 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 KLHL35Q6PF15 583 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 ANGPTL8Q6UXH0 198 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 FKBP9P1Q75LS8 142 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 EPHX4Q8IUS5 362 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 GALNT4Q8N4A0 578 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 C11orf65Q8NCR3 313 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 PYURFQ96I23 114 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 NR1H4Q96RI1 486 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SLC29A1Q99808 456 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 NLNQ9BYT8 704 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 TMEM38AQ9H6F2 299 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SLC35C2Q9NQQ7 365 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 C1GALT1Q9NS00 363 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 RPS6KA6Q9UK32 745 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 UTS2RQ9UKP6 389 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 ACSL6Q9UKU0 697 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 FAF1Q9UNN5 650 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 ATG4BQ9Y4P1 393 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 THADAQ6YHU6 1953 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 KNL1Q8NG31 2342 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 LILRA5A6NI73 299 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 LMO7DNF2Z398 122 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 NOBOXO60393 691 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 UBXN7O94888 489 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 MT-ND1P03886 318 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 PVRP15151 417 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SOAT1P35610 550 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 AFF3P51826 1226 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 BTN3A2P78410 334 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 MED21Q13503 144 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 C16orf72Q14CZ0 275 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SUZ12Q15022 739 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 MANEAQ5SRI9 462 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 GCNT6Q5T4J0 391 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SAXO2Q658L1 398 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 FAM180BQ6P0A1 224 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SPRED1Q7Z699 444 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 OR5AK3PQ8NH89 298 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 UCN3Q969E3 161 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 RERGQ96A58 199 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 NEURL3Q96EH8 262 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SEMA6CQ9H3T2 930 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 Q9H521 79 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 SIRT3Q9NTG7 399 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 RAPGEFL1Q9UHV5 662 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZNF639Q9UID6 485 aa10.85□□□□□ -0.67
SMARCAL1-203ENST00000392128 RNF103-CHMP3A0A140T963 221 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 SAC3D1A6NKF1 404 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 H0YGG7 62 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 SOCS2O14508 198 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ACOX3O15254 700 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 BCAT2O15382 392 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZSCAN9O15535 394 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 PROM1O43490 865 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 AIFM1O95831 613 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ETFAP13804 333 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 CSNK1EP49674 416 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 C21orf59P57076 290 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ARF3P61204 181 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 PPP1CAP62136 330 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 NRF1Q16656 503 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 LRRC23Q53EV4 343 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 CWF19L1Q69YN2 538 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 FRMPD2BQ6IN97 320 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 OGFOD3Q6PK18 319 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 CBLL1Q75N03 491 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 RNF130Q86XS8 419 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZNF655Q8N720 491 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 SERINC2Q96SA4 455 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 KLHL25Q9H0H3 589 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZSCAN32Q9NX65 697 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 FBXW2Q9UKT8 454 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 CES1P1Q9UKY3 287 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 SNX8Q9Y5X2 465 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 LOC105369274A0A096LPK9 316 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 LOC102723532A0A0G2JNH3 316 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms