RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 LRCOL1A6NCL2 159 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MCF2LO15068 1137 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PRAF2O60831 178 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CELF2O95319 508 aaKnown RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PENKP01210 267 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 HSPB1P04792 205 aaKnown RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CCDC159P0C7I6 412 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CSH1P0DML2 217 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CSH2P0DML3 217 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 EEF2P13639 858 aaKnown RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 HSD17B1P14061 328 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 EPORP19235 508 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PCGF2P35227 344 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 HOXD13P35453 343 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TRPC1P48995 793 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SLC26A2P50443 739 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZNF45Q02386 682 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ACSM1Q08AH1 577 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 EIF4EBP1Q13541 118 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PPA1Q15181 289 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TAZQ16635 292 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PPP1R3AQ16821 1122 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FAM174BQ3ZCQ3 159 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 NHSL2Q5HYW2 709 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PAGE2BQ5JRK9 111 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TOR1AIP1Q5JTV8 583 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 C6orf136Q5SQH8 315 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MOXD1Q6UVY6 613 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CENPVQ7Z7K6 275 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SYVN1Q86TM6 617 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MFN1Q8IWA4 741 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TC2NQ8N9U0 490 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 OR13F1Q8NGS4 319 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SECISBP2LQ93073 1101 aaKnown RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 P2RX5Q93086 422 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SPATA33Q96N06 139 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 GCNAQ96QF7 691 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CHCHD6Q9BRQ6 235 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CCDC106Q9BWC9 280 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RSPO3Q9BXY4 272 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 GHITMQ9H3K2 345 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 C5orf66Q9H5L9 145 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RPF1Q9H9Y2 349 aaKnown RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ELL3Q9HB65 397 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CA5BQ9Y2D0 317 aa0.77□□□□□ -2.29
RNU6-1228P-201ENST00000391014 LTBP1Q14766 1721 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TRAV18A0A075B6X5 111 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 EDDM13A0A1B0GTR0 161 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 OR5H15A6NDH6 313 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 GLOD5A6NK44 160 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZNF732B4DXR9 585 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 NEDD8-MDP1E9PL57 170 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 P2RX6O15547 441 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SNAI2O43623 268 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZNF324O75467 553 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 DUSP14O95147 198 aaKnown RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FGF19O95750 216 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 P4HA1P13674 534 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZNF823P16415 610 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SSTR1P30872 391 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 HTR1FP30939 366 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CDH5P33151 784 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ID1P41134 155 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MTCP1P56278 107 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 HERVK_113P61574 105 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RBPJQ06330 500 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SULT2A1Q06520 285 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CNTN1Q12860 1018 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 BECN1Q14457 450 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MAPK11Q15759 364 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 MICAQ29983 383 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 LETM2Q2VYF4 491 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 C14orf28Q4W4Y0 310 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ALFQ53S48 1182 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FAM180BQ6P0A1 224 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TFAP2EQ6VUC0 442 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 PLPPR4Q7Z2D5 763 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ADAMTSL2Q86TH1 951 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TLK2Q86UE8 772 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ELMOD1Q8N336 334 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CADM2Q8N3J6 435 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 FBXW8Q8N3Y1 598 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TFB1MQ8WVM0 346 aaKnown RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 DEDD2Q8WXF8 326 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 RSRC1Q96IZ7 334 aaKnown RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CDHR1Q96JP9 859 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 LRRC3BQ96PB8 259 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 KLHL4Q9C0H6 718 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 NMUR2Q9GZQ4 415 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 XAB2Q9HCS7 855 aaKnown RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 HPS4Q9NQG7 708 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ZNF331Q9NQX6 463 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 NECAP2Q9NVZ3 263 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 DPM3Q9P2X0 92 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 ADD3Q9UEY8 706 aaKnown RBP0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 CIDEBQ9UHD4 219 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 SH3GLB1Q9Y371 365 aa0.76□□□□□ -2.29
RNU6-1228P-201ENST00000391014 A0A0U1RQK1 487 aa0.75□□□□□ -2.29
RNU6-1228P-201ENST00000391014 hCG_1807616A0A1W2PRN6 198 aa0.75□□□□□ -2.29
RNU6-1228P-201ENST00000391014 TMEM110-MUSTN1A8MSY1 372 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms