RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LIPHQ8WWY8 451 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 DNAAF4Q8WXU2 420 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 GLYATL1Q969I3 302 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 MCUR1Q96AQ8 359 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 RAB39BQ96DA2 213 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 FAM71F1Q96KD3 344 aaPredicted RBP5.98□□□□□ -1.45
TRAV35-201ENST00000390462 ZNF396Q96N95 335 aaPredicted RBP5.98□□□□□ -1.45
TRAV35-201ENST00000390462 WWP1Q9H0M0 922 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 TDRD3Q9H7E2 651 aaKnown RBP5.98□□□□□ -1.45
TRAV35-201ENST00000390462 SGK2Q9HBY8 427 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 ZFP14Q9HCL3 533 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 ZFP64Q9NPA5 681 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 CNGB3Q9NQW8 809 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 DDX28Q9NUL7 540 aaKnown RBP5.98□□□□□ -1.45
TRAV35-201ENST00000390462 KLHL28Q9NXS3 571 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 C1RLQ9NZP8 487 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 SEC14L3Q9UDX4 400 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 BCAP29Q9UHQ4 241 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 IFT52Q9Y366 437 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 TMED3Q9Y3Q3 217 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 LOXL2Q9Y4K0 774 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 OVOS2A0A0G2JMS6 1433 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 OVOS2A0A0J9YW53 1432 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 OVOS2Q6IE36 1432 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 SSH2Q76I76 1423 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 ZMYM6O95789 1325 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 RNF123Q5XPI4 1314 aa5.98□□□□□ -1.45
TRAV35-201ENST00000390462 ARHGEF28Q8N1W1 1705 aaKnown RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 KIAA0232Q92628 1395 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 TRAV18A0A075B6X5 111 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 TRAV26-1A0A087WT03 109 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 LOC100506127A0A0U1RQW1 187 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 OR6C74A6NCV1 312 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 H7C1Q1 480 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 DVL1O14640 695 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 CHUKO15111 745 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ARPC3O15145 178 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 FOXN1O15353 648 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 KCNAB3O43448 404 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 RANBP6O60518 1105 aaKnown RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 CDH16O75309 829 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 FGFR1OPO95684 399 aaKnown RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 WDPCPO95876 746 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ADRB1P08588 477 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ODC1P11926 461 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 GOT1P17174 413 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 JUNBP17275 347 aaPredicted RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 FCARP24071 287 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 U2AF2P26368 475 aaKnown RBP eCLIP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 HNRNPH1P31943 449 aaKnown RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 GLIPR1P48060 266 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 CDH12P55289 794 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 CLDN8P56748 225 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 CLDN20P56880 219 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 RPP38P78345 283 aaKnown RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ZXDBP98169 803 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 HOXA4Q00056 320 aaPredicted RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 BTG3Q14201 252 aaPredicted RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 CA9Q16790 459 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 Q3ZCU0 254 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ZC2HC1CQ53FD0 456 aaPredicted RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 FSCBQ5H9T9 825 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 LIPKQ5VXJ0 399 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 HIST2H2AA3Q6FI13 130 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 KIAA1161Q6NSJ0 714 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 FUT10Q6P4F1 479 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ANO5Q75V66 913 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 PTF1AQ7RTS3 328 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ZNF367Q7RTV3 350 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 KATNAL2Q8IYT4 538 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ZNF683Q8IZ20 524 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 LGI4Q8N135 537 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 C1orf52Q8N6N3 182 aaKnown RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 TRPV3Q8NET8 790 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 TRIB2Q92519 343 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 LGALS12Q96DT0 336 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 CASD1Q96PB1 797 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 RTP3Q9BQQ7 232 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 LRRC2Q9BYS8 371 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ZMYND12Q9H0C1 365 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 GANQ9H2C0 597 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 SYNDIG1Q9H7V2 258 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 C10orf88Q9H8K7 445 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 SPAG4Q9NPE6 437 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 LZTFL1Q9NQ48 299 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 SLC2A4RGQ9NR83 387 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 PDGFCQ9NRA1 345 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 P2RX2Q9UBL9 471 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 PEF1Q9UBV8 284 aaKnown RBP5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ERVK-19Q9WJR5 959 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 PCNTO95613 3336 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 PCDH11YQ9BZA8 1340 aa5.97□□□□□ -1.45
TRAV35-201ENST00000390462 ITSN1Q15811 1721 aa5.96□□□□□ -1.45
TRAV35-201ENST00000390462 ADCY9O60503 1353 aa5.96□□□□□ -1.45
TRAV35-201ENST00000390462 NHSQ6T4R5 1651 aa5.96□□□□□ -1.46
TRAV35-201ENST00000390462 LINC00473A8K010 186 aa5.96□□□□□ -1.46
TRAV35-201ENST00000390462 NPIPA2E9PIF3 369 aa5.96□□□□□ -1.46
TRAV35-201ENST00000390462 POC1B-GALNT4F8VUJ3 575 aa5.96□□□□□ -1.46
TRAV35-201ENST00000390462 FOXE1O00358 373 aaPredicted RBP5.96□□□□□ -1.46
TRAV35-201ENST00000390462 PLSCR1O15162 318 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms