RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ITPKBP27987 946 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 HTRA4P83105 476 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF33AQ06730 810 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF235Q14590 738 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 HKDC1Q2TB90 917 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF678Q5SXM1 525 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 TMEM268Q5VZI3 342 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 STEAP3Q658P3 488 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 CDC73Q6P1J9 531 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 GCNT7Q6ZNI0 430 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 PTCHD4Q6ZW05 846 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 AMIGO1Q86WK6 493 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 TRAPPC5Q8IUR0 188 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZDHHC21Q8IVQ6 265 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 FAM185AQ8N0U4 392 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 VWA5B2Q8N398 1253 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 IL31RAQ8NI17 732 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 DEDD2Q8WXF8 326 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 TMEM125Q96AQ2 219 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 L3HYPDHQ96EM0 354 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 DIRAS2Q96HU8 199 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 PRRG3Q9BZD7 231 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF768Q9H5H4 540 aaKnown RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 RANBP3Q9H6Z4 567 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 CACYBPQ9HB71 228 aaKnown RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF541Q9H0D2 1346 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 C13orf42A0A1B0GVH6 325 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 HMX2A2RU54 273 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 LCHNA4D1U4 455 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 FABP12A6NFH5 140 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 YKT6O15498 198 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ADH1BP00325 375 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 PGK2P07205 417 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 IFI30P13284 250 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 MYL12AP19105 171 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 GGT1P19440 569 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 MAKP20794 623 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 GPX3P22352 226 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 PPIBP23284 216 aaKnown RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 HOXA10P31260 410 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 MAP2K4P45985 399 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 HCAR3P49019 387 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ERVFC1P60507 584 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 SP3Q02447 781 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 EMX1Q04741 257 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 CDK5R2Q13319 367 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF484Q5JVG2 852 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 RNFT1Q5M7Z0 435 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 PRAMEF20Q5VT98 475 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 BEND4Q6ZU67 534 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF534Q76KX8 674 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 THNSL2Q86YJ6 484 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 GRAMD2AQ8IUY3 354 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 C2CD4AQ8NCU7 369 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 OR4A16Q8NH70 328 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 C1orf216Q8TAB5 229 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 TRMT10AQ8TBZ6 339 aaKnown RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 BTN2A3PQ96KV6 586 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 FCRL3Q96P31 734 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 SPRTNQ9H040 489 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 HRH4Q9H3N8 390 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 NIPAL2Q9H841 368 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ANKRA2Q9H9E1 313 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 C12orf10Q9HB07 376 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 RBM22Q9NW64 420 aaKnown RBP eCLIP5.51□□□□□ -1.534e-18■■■■■ 95.2
RFC1-202ENST00000381897 COL20A1Q9P218 1284 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 KLQ9UEF7 1012 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 GLS2Q9UI32 602 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF222Q9UK12 451 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 OTCP00480 354 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 THBS1P07996 1170 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 CBSLP0DN79 551 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ATF6P18850 670 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 OXTRP30559 389 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 CBSP35520 551 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 IDH2P48735 452 aaKnown RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 TAF6P49848 677 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 F2RL1P55085 397 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 SNU13P55769 128 aaKnown RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 P2RX3P56373 397 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 HTRA3P83110 453 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 ZNF792Q3KQV3 632 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 SYT6Q5T7P8 510 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 PLCXD3Q63HM9 321 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 CASP12Q6UXS9 341 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 USP45Q70EL2 814 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 MOB2Q70IA6 237 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 CREB3L2Q70SY1 520 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 GPSM1Q86YR5 675 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 PARP16Q8N5Y8 322 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 Q8N9G6 341 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 OR5H6Q8NGV6 325 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 OR8K5Q8NH50 307 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 SLC13A3Q8WWT9 602 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 PABPC5Q96DU9 382 aaKnown RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 ELMOD3Q96FG2 381 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 OTUB1Q96FW1 271 aaPredicted RBP5.51□□□□□ -1.53
RFC1-202ENST00000381897 SLC39A13Q96H72 371 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 SMURF2Q9HAU4 748 aa5.51□□□□□ -1.53
RFC1-202ENST00000381897 POPDC3Q9HBV1 291 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms