RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 CREB3L1Q96BA8 519 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 NMNAT1Q9HAN9 279 aaPredicted RBP14.33□□□□□ -0.12
CTNS-202ENST00000381870 RBPJLQ9UBG7 517 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 SPIN1Q9Y657 262 aaPredicted RBP14.33□□□□□ -0.12
CTNS-202ENST00000381870 IGLV3-10A0A075B6K4 115 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 PRPS1L1P21108 318 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 PTX3P26022 381 aaPredicted RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 PCGF2P35227 344 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 C1DQ13901 141 aaKnown RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 VGLL4Q14135 290 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 ATAT1Q5SQI0 421 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 ANGPTL8Q6UXH0 198 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 HDDC2Q7Z4H3 204 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 SENP5Q96HI0 755 aaPredicted RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 RBP7Q96R05 134 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 TSSK6Q9BXA6 273 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 RANBP3Q9H6Z4 567 aaPredicted RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 PRSS21Q9Y6M0 314 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 NDUFA2O43678 99 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 ATG13O75143 517 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 SYPP08247 313 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 CXCL3P19876 107 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 PSMA3P25788 255 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 MAPK1P28482 360 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 EFEMP1Q12805 493 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 LGALSLQ3ZCW2 172 aaPredicted RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 CRTC2Q53ET0 693 aaPredicted RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 MEDAGQ5VYS4 303 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 TMEM107Q6UX40 140 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 CFAP77Q6ZQR2 320 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 FAM9CQ8IZT9 166 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 ST8SIA4Q92187 359 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 LPPQ93052 612 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 LINC00052Q96N35 136 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 ZNF578Q96N58 590 aaPredicted RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 PKMYT1Q99640 499 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 MGME1Q9BQP7 344 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 HTATIP2Q9BUP3 242 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 MCCC2Q9HCC0 563 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 CUEDC1Q9NWM3 386 aaPredicted RBP14.32□□□□□ -0.12
CTNS-202ENST00000381870 KCMF1Q9P0J7 381 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 TNFRSF10DQ9UBN6 386 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 UBQLN2Q9UHD9 624 aa14.32□□□□□ -0.12
CTNS-202ENST00000381870 ADM5C9JUS6 153 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 GADD45GO95257 159 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 SLC25A14O95258 325 aaPredicted RBP14.31□□□□□ -0.12
CTNS-202ENST00000381870 CPEP16870 476 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 HK1P19367 917 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 BMP8BP34820 402 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 ETV5P41161 510 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 LIMS1P48059 325 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 EVX1P49640 407 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 ETV1P50549 477 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 ZNF81P51508 661 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 SRSF11Q05519 484 aaKnown RBP14.31□□□□□ -0.12
CTNS-202ENST00000381870 GPR176Q14439 515 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 COX20Q5RI15 118 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 TRILQ7L0X0 811 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 BMP8AQ7Z5Y6 402 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 MIB1Q86YT6 1006 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 CFAP52Q8N1V2 620 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 C11orf65Q8NCR3 313 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 OR7D4Q8NG98 312 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 TMEM163Q8TC26 289 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 ACBD6Q9BR61 282 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 FOLH1BQ9HBA9 442 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 RDH8Q9NYR8 311 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 TRAV6A0A075B6T7 132 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 C2orf78A6NCI8 922 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 NUPL2O15504 423 aaKnown RBP14.31□□□□□ -0.12
CTNS-202ENST00000381870 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
CTNS-202ENST00000381870 IFNA7P01567 189 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 ETFAP13804 333 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 CRATP43155 626 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 RGS4P49798 205 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 NDUFAF5Q5TEU4 345 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 SHEQ5VZ18 495 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 CEACAM20Q6UY09 585 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 ASB18Q6ZVZ8 466 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 SCN4BQ8IWT1 228 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 OR52H1Q8NGJ2 320 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 LILRB1Q8NHL6 650 aaPredicted RBP14.31□□□□□ -0.12
CTNS-202ENST00000381870 UBTD2Q8WUN7 234 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 PIP5K1AQ99755 562 aa14.31□□□□□ -0.12
CTNS-202ENST00000381870 MRPL39Q9NYK5 338 aaKnown RBP14.31□□□□□ -0.12
CTNS-202ENST00000381870 C1orf226A1L170 272 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 A8MVJ9 347 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 SGK494L7N484 410 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 CASKO14936 926 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 INSIG1O15503 277 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 LANCL1O43813 399 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 PAHP00439 452 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 IFNA16P05015 189 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 MMP3P08254 477 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 BPIP17213 487 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 GBX2P52951 348 aaPredicted RBP14.3□□□□□ -0.12
CTNS-202ENST00000381870 SNRPGP62308 76 aaKnown RBP14.3□□□□□ -0.12
CTNS-202ENST00000381870 TEAD4Q15561 434 aa14.3□□□□□ -0.12
CTNS-202ENST00000381870 ZXDCQ2QGD7 858 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms