RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CCZ1P86791 482 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-203ENST00000380748 REEP5Q00765 189 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 DHX9Q08211 1270 aaKnown RBP15.96■□□□□ 0.15
HMGN1-203ENST00000380748 ELAVL1Q15717 326 aaKnown RBP15.96■□□□□ 0.15
HMGN1-203ENST00000380748 KCTD19Q17RG1 926 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-203ENST00000380748 CAPN12Q6ZSI9 719 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 LACC1Q8IV20 430 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 TMEM132CQ8N3T6 1108 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 OR56A3Q8NH54 315 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 EEF1AKMT1Q8WVE0 214 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 NEIL2Q969S2 332 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 TSNARE1Q96NA8 513 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 CLCA3PQ9Y6N3 262 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 FREM3P0C091 2139 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 TCRBV7S3A2A0A539 114 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 RNF212BA8MTL3 300 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 AHRRA9YTQ3 701 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 EIF3FO00303 357 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-203ENST00000380748 CLDN4O14493 209 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 IL2RAP01589 272 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 IFNA16P05015 189 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 PAMP19021 973 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 RNF4P78317 190 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 CBLBQ13191 982 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 SP140Q13342 867 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 CSHL1Q14406 222 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 PRAMEF20Q5VT98 475 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 OPN5Q6U736 354 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 LRRC25Q8N386 305 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-203ENST00000380748 LIX1Q8N485 282 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 PTPMT1Q8WUK0 201 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-203ENST00000380748 PIP5K1AQ99755 562 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 WDR83Q9BRX9 315 aaKnown RBP15.95■□□□□ 0.14
HMGN1-203ENST00000380748 FRMD8P1Q9BZ68 369 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-203ENST00000380748 OR8D2Q9GZM6 311 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 SH2D2AQ9NP31 389 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 ZFP64Q9NPA5 681 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 ACKR4Q9NPB9 350 aa15.95■□□□□ 0.14
HMGN1-203ENST00000380748 CHD3Q12873 2000 aaKnown RBP15.95■□□□□ 0.14
HMGN1-203ENST00000380748 C15orf38-AP3S2A0A0A6YYH1 394 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 SLC1A2P43004 574 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 RAB38P57729 211 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 KCNJ2P63252 427 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 SIX1Q15475 284 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-203ENST00000380748 DUPD1Q68J44 220 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 PRSS57Q6UWY2 283 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 PHC2Q8IXK0 858 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 MORN4Q8NDC4 146 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 TRPV3Q8NET8 790 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 SLC5A11Q8WWX8 675 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 SMPDL3BQ92485 455 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 HSPBAP1Q96EW2 488 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 PERPQ96FX8 193 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 DACH2Q96NX9 599 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 JKAMPQ9P055 326 aa15.94■□□□□ 0.14
HMGN1-203ENST00000380748 TRMT6Q9UJA5 497 aaKnown RBP15.94■□□□□ 0.14
HMGN1-203ENST00000380748 BOKQ9UMX3 212 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-203ENST00000380748 EPN1Q9Y6I3 576 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-203ENST00000380748 SH3D21A4FU49 640 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 CRLF1O75462 422 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 SERPINA6P08185 405 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 SAT1P21673 171 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 TIAL1Q01085 375 aaKnown RBP eCLIP15.93■□□□□ 0.14
HMGN1-203ENST00000380748 CRYZQ08257 329 aaKnown RBP15.93■□□□□ 0.14
HMGN1-203ENST00000380748 DHX34Q14147 1143 aaKnown RBP15.93■□□□□ 0.14
HMGN1-203ENST00000380748 RBBP5Q15291 538 aaKnown RBP15.93■□□□□ 0.14
HMGN1-203ENST00000380748 ZNF791Q3KP31 576 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-203ENST00000380748 BBS9Q3SYG4 887 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 SLC22A10Q63ZE4 541 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 NSUN5P2Q63ZY6 315 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 LRRC8EQ6NSJ5 796 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 CASC4Q6P4E1 433 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 PALM2Q8IXS6 379 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 OR8K3Q8NH51 312 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 DAZLQ92904 295 aaKnown RBP15.93■□□□□ 0.14
HMGN1-203ENST00000380748 ZNF669Q96BR6 464 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-203ENST00000380748 HES6Q96HZ4 224 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 DOCK7Q96N67 2140 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 CSF3RQ99062 836 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 PROK2Q9HC23 129 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 ARL15Q9NXU5 204 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 NINQ8N4C6 2090 aa15.93■□□□□ 0.14
HMGN1-203ENST00000380748 HAUS5O94927 633 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 LRATO95237 230 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 HIST1H2AGP0C0S8 130 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-203ENST00000380748 HIST1H2ADP20671 130 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 CTSSP25774 331 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 TERF1P54274 439 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 ASPHQ12797 758 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 DUSP8Q13202 625 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 THOC5Q13769 683 aaKnown RBP15.92■□□□□ 0.14
HMGN1-203ENST00000380748 UGT3A1Q6NUS8 523 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 ZNF595Q8IYB9 648 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 MYO1HQ8N1T3 1032 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 OR5L2Q8NGL0 311 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 OR14A16Q8NHC5 309 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 SLC2A12Q8TD20 617 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 PAQR8Q8TEZ7 354 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 PIGTQ969N2 578 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 FAR2Q96K12 515 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms