RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KCNC2Q96PR1 638 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 CENPKQ9BS16 269 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 TBCDQ9BTW9 1192 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 NTMT1Q9BV86 223 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 NUDT9Q9BW91 350 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 NPLQ9BXD5 320 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 C1QTNF3Q9BXJ4 246 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 ROGDIQ9GZN7 287 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 C12orf65Q9H3J6 166 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 ELOVL6Q9H5J4 265 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 DMRT3Q9NQL9 472 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 LANCL2Q9NS86 450 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 GPR83Q9NYM4 423 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 LGALS13Q9UHV8 139 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF451Q9Y4E5 1061 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 PCDHGA9Q9Y5G4 932 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 MDC1Q14676 2089 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 LOC102723996A0A087X1L8 192 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MAGEB17A8MXT2 336 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 G3V2L1 256 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PCDH17O14917 1159 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MAN1A2O60476 641 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PLIN3O60664 434 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 SPAG7O75391 227 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 ERLIN1O75477 346 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 OR4F21O95013 312 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MLYCDO95822 493 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 UQCRHP07919 91 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 CYC1P08574 325 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 CPA3P15088 417 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 ATP5A1P25705 553 aaKnown RBP8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PTX3P26022 381 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MSX1P28360 303 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PIK3CBP42338 1070 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 LIM2P55344 173 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 RAB38P57729 211 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 OR4D2P58180 307 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 BTG2P78543 158 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 RHAGQ02094 409 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 SLC18A2Q05940 514 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF844Q08AG5 666 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 IFT88Q13099 833 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MYBPC3Q14896 1274 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PCOLCEQ15113 449 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 SFT2D3Q587I9 215 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 DEPDC1Q5TB30 811 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 FRG2Q64ET8 278 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 OR4C11Q6IEV9 310 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF793Q6ZN11 406 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 GPRIN3Q6ZVF9 776 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 UBE3DQ7Z6J8 389 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 ANKRD37Q7Z713 158 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 KBTBD2Q8IY47 623 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 ACOT4Q8N9L9 421 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PLPP5Q8NEB5 264 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 WDR20Q8TBZ3 569 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 RDH11Q8TC12 318 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 TSLPQ969D9 159 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MIB2Q96AX9 1013 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 RGMAQ96B86 450 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 L3HYPDHQ96EM0 354 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 APOPT1Q96IL0 206 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MAGEB10Q96LZ2 347 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 FRG2BQ96QU4 278 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 TMEM109Q9BVC6 243 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 SORBS1Q9BX66 1292 aaKnown RBP8.68□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF700Q9H0M5 742 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 CENPHQ9H3R5 247 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 PRDM7Q9NQW5 492 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 RIC8BQ9NVN3 520 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 TRPS1Q9UHF7 1281 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 MID2Q9UJV3 735 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 TSC22D4Q9Y3Q8 395 aa8.68□□□□□ -1.02
HMGN1-202ENST00000380747 A0A1B0GTL3 188 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 BLACEA4D250 179 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 ENO4A6NNW6 628 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 FOXE1O00358 373 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-202ENST00000380747 CLDN4O14493 209 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 PLPP1O14494 284 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 RGS16O15492 202 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-202ENST00000380747 KLHL41O60662 606 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 ETHE1O95571 254 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 ALPPP05187 535 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 SERPINA7P05543 415 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 CELA2AP08217 269 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 MAOAP21397 527 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 HIST1H1TP22492 207 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-202ENST00000380747 CPN2P22792 545 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 MAPK1P28482 360 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 FBN2P35556 2912 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 NAGLUP54802 743 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 Q0VFX4 171 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 LCP2Q13094 533 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 SLC13A2Q13183 592 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 RCN2Q14257 317 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.67□□□□□ -1.02
HMGN1-202ENST00000380747 GGTA1PQ4G0N0 100 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 CFAP157Q5JU67 520 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 CEP85LQ5SZL2 805 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms