RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 WDR92Q96MX6 357 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 APOL4Q9BPW4 351 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 SLC6A17Q9H1V8 727 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 XKR8Q9H6D3 395 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 FGF22Q9HCT0 170 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 PRDM8Q9NQV8 689 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 KIF17Q9P2E2 1029 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 PLEKHM1Q9Y4G2 1056 aa21.99■■□□□ 1.11
VPS16-201ENST00000380443 LRRC72A6NJI9 287 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 DNAJB5O75953 348 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 PPP2CBP62714 309 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 PPP2CAP67775 309 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 CD47Q08722 323 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 TJAP1Q5JTD0 557 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 REEP3Q6NUK4 255 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 OR2L3Q8NG85 312 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 SPPL2AQ8TCT8 520 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 NRTNQ99748 197 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 ADNPQ9H2P0 1102 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 POLR1BQ9H9Y6 1135 aa21.98■■□□□ 1.11
VPS16-201ENST00000380443 M0QX08 132 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 LATO43561 262 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 TRMUO75648 421 aaKnown RBP21.97■■□□□ 1.11
VPS16-201ENST00000380443 GLULP15104 373 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 SSR2P43308 183 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 ALDH9A1P49189 494 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 YPEL5P62699 121 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 SMAD2Q15796 467 aaKnown RBP21.97■■□□□ 1.11
VPS16-201ENST00000380443 SLC22A18Q96BI1 424 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 MRGPRX1Q96LB2 322 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 CXorf21Q9HAI6 301 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 FZD3Q9NPG1 666 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 KRT84Q9NSB2 600 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 TMEM9Q9P0T7 183 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 ACSL6Q9UKU0 697 aa21.97■■□□□ 1.11
VPS16-201ENST00000380443 OR52A4PA6NMU1 304 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 TMPRSS11DO60235 418 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 PDE9AO76083 593 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 HNRNPA2B1P22626 353 aaKnown RBP21.96■■□□□ 1.11
VPS16-201ENST00000380443 AQP1P29972 269 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 SLC9A5Q14940 896 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 TSPYL5Q86VY4 417 aaPredicted RBP21.96■■□□□ 1.11
VPS16-201ENST00000380443 ATG16L2Q8NAA4 619 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 MFSD9Q8NBP5 474 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 TAMM41Q96BW9 452 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 KCNC2Q96PR1 638 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 SLC24A3Q9HC58 644 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 NDUFAF4Q9P032 175 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 DOCK9Q9BZ29 2069 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 MRPS14O60783 128 aaKnown RBP21.96■■□□□ 1.11
VPS16-201ENST00000380443 SLC5A2P31639 672 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 BCL6P41182 706 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 TGM3Q08188 693 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 ANKRD34AQ69YU3 496 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 ENPP7Q6UWV6 458 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 OR5AK3PQ8NH89 298 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 MSANTD3Q96H12 275 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 ZNF300Q96RE9 604 aaPredicted RBP21.96■■□□□ 1.11
VPS16-201ENST00000380443 MYOCQ99972 504 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 SLC6A20Q9NP91 592 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 SNX8Q9Y5X2 465 aa21.96■■□□□ 1.11
VPS16-201ENST00000380443 C5orf58C9J3I9 102 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 TNFRSF11BO00300 401 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 ANXA8P13928 327 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 DCKP27707 260 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 LRRC32Q14392 662 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 MEP1AQ16819 746 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 KIAA1614Q5VZ46 1190 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 ZNF425Q6IV72 752 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 CEACAM20Q6UY09 585 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 AMIGO1Q86WK6 493 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 CLVS1Q8IUQ0 354 aaPredicted RBP21.95■■□□□ 1.1
VPS16-201ENST00000380443 MMP21Q8N119 569 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 TTC29Q8NA56 475 aaPredicted RBP21.95■■□□□ 1.1
VPS16-201ENST00000380443 OR2L5Q8NG80 312 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 GIPC3Q8TF64 312 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 DOK1Q99704 481 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 DPH7Q9BTV6 452 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 NDRG4Q9ULP0 352 aaKnown RBP21.95■■□□□ 1.1
VPS16-201ENST00000380443 COL4A2P08572 1712 aa21.95■■□□□ 1.1
VPS16-201ENST00000380443 POM121BA6NF01 834 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 DIRAS1O95057 198 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 RRM2P31350 389 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 CDK5R2Q13319 367 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 PMS2P3Q13401 168 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 RAB39AQ14964 217 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 SPDYE7PQ495Y7 208 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 C6orf120Q7Z4R8 191 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 ZFPM2Q8WW38 1151 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 RASSF5Q8WWW0 418 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 LCN9Q8WX39 176 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 OR1E3Q8WZA6 343 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 TEFMQ96QE5 360 aaKnown RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 PITX2Q99697 317 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 BARD1Q99728 777 aaKnown RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 PSD2Q9BQI7 771 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 RIBC2Q9H4K1 309 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 TIMMDC1Q9NPL8 285 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 SLAMF7Q9NQ25 335 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 GMPPBQ9Y5P6 360 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms