RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MRPL38Q96DV4 380 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 CAMK1GQ96NX5 476 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 TRIM54Q9BYV2 358 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 MRPL37Q9BZE1 423 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 MIXL1Q9H2W2 232 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 RUVBL1Q9Y265 456 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 PKP3Q9Y446 797 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 KLK4Q9Y5K2 254 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ICOSLGO75144 302 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 RECQL4O94761 1208 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 METTL18O95568 372 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ANXA8P13928 327 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ADRB3P13945 408 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 DCTP40126 519 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CRISP3P54108 245 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 HUNKP57058 714 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TLE2Q04725 743 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 MXD1Q05195 221 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM31Q5JXX7 168 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ANXA8L1Q5VT79 327 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 FAM217AQ8IXS0 508 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF383Q8NA42 475 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM145Q8NBT3 493 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 OR2T35Q8NGX2 323 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 HGDQ93099 445 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM143Q96AN5 459 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 OTUB1Q96FW1 271 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 XKR8Q9H6D3 395 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 FAM212BQ9NTI7 297 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 WBP1LQ9NX94 342 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TMEFF2Q9UIK5 374 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 MYO18AQ92614 2054 aaKnown RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 A0A1W2PQL4 384 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CXorf65A6NEN9 183 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 SLC7A4O43246 635 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 AKR7A3O95154 331 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 SYPP08247 313 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 FGF4P08620 206 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 FAM157BP0CG42 384 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CLUP10909 449 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 RPS2P15880 293 aaKnown RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 SLC25A11Q02978 314 aaKnown RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 GLO1Q04760 184 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CLINT1Q14677 625 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 RPS6KA2Q15349 733 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TSTQ16762 297 aaKnown RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 DUOXA2Q1HG44 320 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 KANK2Q63ZY3 851 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 NAPEPLDQ6IQ20 393 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CYP4Z1Q86W10 505 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 EFHBQ8N7U6 833 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 OR5K1Q8NHB7 308 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TCTEX1D2Q8WW35 142 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 SLAMF9Q96A28 289 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ADPGKQ9BRR6 497 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CISHQ9NSE2 258 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 OR6C2Q9NZP2 312 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 M0QZ92 97 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 C4BPAP04003 597 aaKnown RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CDH4P55283 916 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 LIPJQ5W064 366 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CST9Q5W186 159 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 OR6B2Q6IFH4 312 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 SLC26A9Q7LBE3 791 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM179BQ7Z7N9 219 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ADGRF3Q8IZF5 1079 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 UBA3Q8TBC4 463 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 SCARB1Q8WTV0 552 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 DNASE1L2Q92874 299 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 C3orf30Q96M34 536 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 SIGLEC11Q96RL6 698 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 C2orf88Q9BSF0 95 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM43Q9BTV4 400 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 UNKLQ9H9P5 680 aaKnown RBP8.98□□□□□ -0.97
PTPRA-204ENST00000380393 CDH10Q9Y6N8 788 aa8.98□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF638Q14966 1978 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ARNTLO00327 626 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CD3EAPO15446 510 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 C22orf31O95567 290 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 RECKO95980 971 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PTHP01270 115 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 HOXC4P09017 264 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 GPX3P22352 226 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MGAT1P26572 445 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CRABP1P29762 137 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 AVPR1AP37288 418 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CRATP43155 626 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 LRRC32Q14392 662 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MEDAGQ5VYS4 303 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 FSTL4Q6MZW2 842 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CAPN13Q6MZZ7 669 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF534Q76KX8 674 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PUSL1Q8N0Z8 303 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 FAM86B1Q8N7N1 296 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CHURC1Q8WUH1 139 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 HBEGFQ99075 208 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CGRRF1Q99675 332 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 C7orf50Q9BRJ6 194 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms