RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 CUL9Q8IWT3 2517 aa20.51■□□□□ 0.87
TRIM54-202ENST00000380075 A0A1W2PP55 124 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 ADAM23O75077 832 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 TRA2BP62995 288 aaKnown RBP20.5■□□□□ 0.87
TRIM54-202ENST00000380075 CSNK2BP67870 215 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 NPRL3Q12980 569 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 NUDT13Q86X67 352 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 ARMC8Q8IUR7 673 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 FBXL6Q8N531 539 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 TMEM105Q8N8V8 129 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 GIPC3Q8TF64 312 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 TAMM41Q96BW9 452 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 TM4SF18Q96CE8 201 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 C1QTNF7Q9BXJ2 289 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 C1QTNF2Q9BXJ5 285 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 OR1A2Q9Y585 309 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 LYVE1Q9Y5Y7 322 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 ATG2BQ96BY7 2078 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 TNFRSF11BO00300 401 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 NTSR1P30989 418 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 PCBP3P57721 371 aaKnown RBP20.5■□□□□ 0.87
TRIM54-202ENST00000380075 HPCAP84074 193 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 SGCGQ13326 291 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 B3GNT8Q7Z7M8 397 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 CNIH3Q8TBE1 160 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 RGMAQ96B86 450 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 NEURL3Q96EH8 262 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 C12orf66Q96MD2 445 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 ZNF300Q96RE9 604 aaPredicted RBP20.5■□□□□ 0.87
TRIM54-202ENST00000380075 FERD3LQ96RJ6 166 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 SORBS1Q9BX66 1292 aaKnown RBP20.5■□□□□ 0.87
TRIM54-202ENST00000380075 DUSP21Q9H596 190 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 SERGEFQ9UGK8 458 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 ACSL6Q9UKU0 697 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 ZFR2Q9UPR6 939 aaKnown RBP20.5■□□□□ 0.87
TRIM54-202ENST00000380075 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.5■□□□□ 0.87
TRIM54-202ENST00000380075 MAP4K5Q9Y4K4 846 aa20.5■□□□□ 0.87
TRIM54-202ENST00000380075 PDPK1O15530 556 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 CLEC3AO75596 197 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 ANXA8P13928 327 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 PCMT1P22061 227 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 PXNP49023 591 aaPredicted RBP20.49■□□□□ 0.87
TRIM54-202ENST00000380075 RAB28P51157 221 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 PLA2G16P53816 162 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 DSTNP60981 165 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 MAD2L1BPQ15013 274 aaPredicted RBP20.49■□□□□ 0.87
TRIM54-202ENST00000380075 PRSS53Q2L4Q9 553 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 PROX2Q3B8N5 592 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 FAM124AQ86V42 546 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 FAM131CQ96AQ9 280 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 THAP11Q96EK4 314 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 F2RL3Q96RI0 385 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 BCL7BQ9BQE9 202 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 DCUN1D5Q9BTE7 237 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 FBRSQ9HAH7 460 aa20.49■□□□□ 0.87
TRIM54-202ENST00000380075 NUP214P35658 2090 aaPredicted RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 CHURC1-FNTBB4DL54 471 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 H7BY64 318 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 NDUFS4O43181 175 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 PAK4O96013 591 aaPredicted RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 CYP4B1P13584 511 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 ACP5P13686 325 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 FRKP42685 505 aaPredicted RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 CYP4F2P78329 520 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 PRDX1Q06830 199 aaKnown RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 FGL2Q14314 439 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 SAXO2Q658L1 398 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 TSEN54Q7Z6J9 526 aaKnown RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 CACUL1Q86Y37 369 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 CROCCP3Q8IVE0 287 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 ADGRF3Q8IZF5 1079 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 OR5AK3PQ8NH89 298 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 SGCDQ92629 289 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 HRASLS5Q96KN8 279 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 PRAP1Q96NZ9 151 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 INSM2Q96T92 566 aaPredicted RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 NAA50Q9GZZ1 169 aaKnown RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 PAK1IP1Q9NWT1 392 aaPredicted RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 SLC17A4Q9Y2C5 497 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 ZDBF2Q9HCK1 2354 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 CKAP5Q14008 2032 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 PTGES3LE9PB15 166 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 DLL1O00548 723 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 SLC35A2P78381 396 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 NFATC3Q12968 1075 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 LINC01555Q8NAE3 123 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 OR4C15Q8NGM1 316 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 OR2L8Q8NGY9 312 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 IPCEF1Q8WWN9 437 aaPredicted RBP20.48■□□□□ 0.87
TRIM54-202ENST00000380075 PDXPQ96GD0 296 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 MVB12BQ9H7P6 319 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 CXorf36Q9H7Y0 433 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 PSME2Q9UL46 239 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 MMP17Q9ULZ9 603 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 WDR37Q9Y2I8 494 aa20.48■□□□□ 0.87
TRIM54-202ENST00000380075 A0A1W2PPW3 197 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 PLRG1O43660 514 aaKnown RBP20.47■□□□□ 0.87
TRIM54-202ENST00000380075 OPN1SWP03999 348 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 MANFP55145 182 aaKnown RBP20.47■□□□□ 0.87
TRIM54-202ENST00000380075 RPP38P78345 283 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms