RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 FBXO9Q9UK97 447 aaPredicted RBP13.08□□□□□ -0.32
GPC6-201ENST00000377047 SCML1Q9UN30 329 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 MEMO1Q9Y316 297 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ACTL7AQ9Y615 435 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ARPC4P59998 168 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ZFP69Q49AA0 526 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 THOC7Q6I9Y2 204 aaKnown RBP13.08□□□□□ -0.32
GPC6-201ENST00000377047 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ZNF100Q8IYN0 542 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 SLC39A11Q8N1S5 342 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 PELOQ9BRX2 385 aaKnown RBP13.08□□□□□ -0.32
GPC6-201ENST00000377047 GPR89AB7ZAQ6 455 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 GPR89BP0CG08 455 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 FPR1P21462 350 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 PRKACGP22612 351 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 PRKCDQ05655 676 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 TSTQ16762 297 aaKnown RBP13.08□□□□□ -0.32
GPC6-201ENST00000377047 TECRLQ5HYJ1 363 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ZNF227Q86WZ6 799 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 GALNT12Q8IXK2 581 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 TESCQ96BS2 214 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 PRR11Q96HE9 360 aaPredicted RBP13.08□□□□□ -0.32
GPC6-201ENST00000377047 SP140LQ9H930 580 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ZBTB20Q9HC78 741 aaPredicted RBP13.08□□□□□ -0.32
GPC6-201ENST00000377047 ZNF221Q9UK13 617 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 SLC35F4A4IF30 521 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 H6PDO95479 791 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 PROZP22891 400 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 SCAPQ12770 1279 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 C6orf136Q5SQH8 315 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 KLF11O14901 512 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 ENTPD6O75354 484 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 DOC2AQ14183 400 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 LRIT3Q3SXY7 679 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 C4orf46Q504U0 113 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 CARM1Q86X55 608 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 OR5L2Q8NGL0 311 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 OR8K5Q8NH50 307 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 TM9SF3Q9HD45 589 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 L7N2F9 121 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 CBFA2T3O75081 653 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 PRH1P02810 166 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 P04436 131 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 MRPL3P09001 348 aaKnown RBP13.07□□□□□ -0.32
GPC6-201ENST00000377047 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
GPC6-201ENST00000377047 DIO3P55073 304 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 VAMP2P63027 116 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 RAB39AQ14964 217 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 NSDHLQ15738 373 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 DEFB133Q30KQ1 61 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 LIN52Q52LA3 116 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 TMPPEQ6ZT21 453 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 DNAJC27Q9NZQ0 273 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 ACOX3O15254 700 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 NPPAP01160 153 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 RLN2P04090 185 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 GSTM4Q03013 218 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 DSC1Q08554 894 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 LRIF1Q5T3J3 769 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 TAS1R1Q7RTX1 841 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 CCDC36Q8IYA8 594 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 VNN3Q9NY84 501 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 NAV1Q8NEY1 1877 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 ENTPD1P49961 510 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 SLC18A1P54219 525 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 SHC2P98077 582 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 CDKL1Q00532 357 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 GRM7Q14831 915 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 RAB6CQ53S08 254 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 ZFAND4Q86XD8 727 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 NPWQ8N729 165 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 BORCS8Q96FH0 119 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 RAB6CQ9H0N0 254 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 GDE1Q9NZC3 331 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 RTCAO00442 366 aaKnown RBP13.07□□□□□ -0.32
GPC6-201ENST00000377047 HSPA12AO43301 675 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 SEC14L5O43304 696 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 DFNA5O60443 496 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 PSKH1P11801 424 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 RPS3AP61247 264 aaKnown RBP13.07□□□□□ -0.32
GPC6-201ENST00000377047 FCHO2Q0JRZ9 810 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 PTGR1Q14914 329 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 TYSND1Q2T9J0 566 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 PRAMEF17Q5VTA0 474 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 OR56A3Q8NH54 315 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 PHOSPHO2Q8TCD6 241 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 CLPXO76031 633 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 PROS1P07225 676 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 PORP16435 677 aaPredicted RBP13.07□□□□□ -0.32
GPC6-201ENST00000377047 ZNF16P17020 682 aaPredicted RBP13.07□□□□□ -0.32
GPC6-201ENST00000377047 SLC9A3P48764 834 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 ZNF234Q14588 700 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 OR52E8Q6IFG1 317 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 ZNF565Q8N9K5 539 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 TIMMDC1Q9NPL8 285 aa13.07□□□□□ -0.32
GPC6-201ENST00000377047 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms