RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CD1DP15813 335 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CERS1P27544 350 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 TLX1P31314 330 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-204ENST00000376643 STX2P32856 288 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CASP2P42575 452 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 RPL21P46778 160 aaKnown RBP13.71□□□□□ -0.21
HDAC6-204ENST00000376643 ARFIP1P53367 373 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 NAB1Q13506 487 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 DOC2AQ14183 400 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 FASTKD3Q14CZ7 662 aaKnown RBP13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 GRTP1Q5TC63 336 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 MED27Q6P2C8 311 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 TBC1D1Q86TI0 1168 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CTAGE6Q86UF2 777 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CHERPQ8IWX8 916 aaKnown RBP13.71□□□□□ -0.21
HDAC6-204ENST00000376643 CMTM7Q96FZ5 175 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 PELOQ9BRX2 385 aaKnown RBP13.71□□□□□ -0.21
HDAC6-204ENST00000376643 AICDAQ9GZX7 198 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 GRPEL1Q9HAV7 217 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 MCCC2Q9HCC0 563 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.21
HDAC6-204ENST00000376643 PTBP2Q9UKA9 531 aaKnown RBP13.71□□□□□ -0.21
HDAC6-204ENST00000376643 PCNX1Q96RV3 2341 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 C17orf105B2RV13 164 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 WISP2O76076 250 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 SCELO95171 688 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 WISP3O95389 354 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-204ENST00000376643 P04436 131 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 CNR1P21554 472 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 CRABP2P29373 138 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 MSH2P43246 934 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 GPR85P60893 370 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 PPIAP62937 165 aaKnown RBP13.7□□□□□ -0.22
HDAC6-204ENST00000376643 CHIT1Q13231 466 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 ZKSCAN8Q15776 578 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-204ENST00000376643 IL20RBQ6UXL0 311 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 MEX3BQ6ZN04 569 aaKnown RBP13.7□□□□□ -0.22
HDAC6-204ENST00000376643 CAPN12Q6ZSI9 719 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 C3orf62Q6ZUJ4 267 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 RAPH1Q70E73 1250 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 MDGA2Q7Z553 956 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 CLNKQ7Z7G1 428 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 CTAGE3PQ8IX95 158 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 FAM109AQ8N4B1 249 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 MYRIPQ8NFW9 859 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 OR2M7Q8NG81 312 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 NUBPLQ8TB37 319 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 SLC22A8Q8TCC7 542 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 REPS1Q96D71 796 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 UBXN10Q96LJ8 280 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 RASL10BQ96S79 203 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 ERP44Q9BS26 406 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 CD244Q9BZW8 370 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 OR8D2Q9GZM6 311 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 ZDHHC11Q9H8X9 412 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 KCNJ16Q9NPI9 418 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 SACM1LQ9NTJ5 587 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 OPTCQ9UBM4 332 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 PHF11Q9UIL8 331 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 ZNF223Q9UK11 482 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-204ENST00000376643 MTO1Q9Y2Z2 717 aaKnown RBP13.7□□□□□ -0.22
HDAC6-204ENST00000376643 UTP11Q9Y3A2 253 aaKnown RBP13.7□□□□□ -0.22
HDAC6-204ENST00000376643 APCP25054 2843 aa13.7□□□□□ -0.22
HDAC6-204ENST00000376643 TCRBV9S1A1TA0A576 114 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 FAM159BA6NKW6 160 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 ADAM10O14672 748 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 TP73O15350 636 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 TAPBPO15533 448 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 PHGDHO43175 533 aaKnown RBP13.69□□□□□ -0.22
HDAC6-204ENST00000376643 HOXD4P09016 255 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-204ENST00000376643 HIST1H1TP22492 207 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-204ENST00000376643 CPN2P22792 545 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 SSTR1P30872 391 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 RFC3P40938 356 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 SSR2P43308 183 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 RAP1GDS1P52306 607 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 HK2P52789 917 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 RIPPLY3P57055 190 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 RNF4P78317 190 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 PLIN5Q00G26 463 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 TLE4Q04727 773 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 PCDH1Q08174 1060 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 E2F2Q14209 437 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 MPEG1Q2M385 716 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 C18orf21Q32NC0 220 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-204ENST00000376643 C3P1Q6ZMU1 363 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 FGD2Q7Z6J4 655 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 LAS2Q8IYD9 372 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 ZNF295-AS1Q8N0V1 137 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 SLC15A4Q8N697 577 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 ACOT4Q8N9L9 421 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 ACBD4Q8NC06 268 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 OR5M3Q8NGP4 307 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 LILRB4Q8NHJ6 448 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 SLC2A12Q8TD20 617 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 ZNF473Q8WTR7 871 aaKnown RBP13.69□□□□□ -0.22
HDAC6-204ENST00000376643 UBTD2Q8WUN7 234 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 RBM18Q96H35 190 aaKnown RBP13.69□□□□□ -0.22
HDAC6-204ENST00000376643 DGAT2Q96PD7 388 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms