RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	CDH12	P55289	794 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	CSNK1G2	P78368	415 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	NR0B2	Q15466	257 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	INAVA	Q3KP66	663 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	C14orf28	Q4W4Y0	310 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	FAM111B	Q6SJ93	734 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	PRSS41	Q7RTY9	318 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	C11orf65	Q8NCR3	313 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	TTL	Q8NG68	377 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	ACTRT2	Q8TDY3	377 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	PHF10	Q8WUB8	498 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	DNAJC9	Q8WXX5	260 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	CRB3	Q9BUF7	120 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	REEP4	Q9H6H4	257 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	RASSF1	Q9NS23	344 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	SLC39A1	Q9NY26	324 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	PTRH2	Q9Y3E5	179 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	HS3ST3A1	Q9Y663	406 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	TEX51	A0A1B0GUA7	166 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	PNMA8C	A0A1B0GUJ8	204 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	C17orf113	A0A1B0GUU1	675 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	PGRMC2	O15173	223 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	DUSP3	P51452	185 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	GCNT6	Q5T4J0	391 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	LSR	Q86X29	649 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	QRSL1	Q9H0R6	528 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	KIR3DX1	Q9H7L2	352 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	REEP1	Q9H902	201 aa		12.88	□□□□□ -0.35
DDR1-225	ENST00000376568	PCM1	Q15154	2024 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	SPAAR	A0A1B0GVQ0	90 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568		A0A1W2PP18	115 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	HYKK	A2RU49	373 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	PSIP1	O75475	530 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	PIAS2	O75928	621 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	CCNYL3	P0C7X3	344 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	FBL	P22087	321 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	SYNPO	Q8N3V7	929 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	OXR1	Q8N573	874 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	ALOXE3	Q9BYJ1	711 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	SLC6A16	Q9GZN6	736 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	DCLRE1B	Q9H816	532 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	YY1AP1	Q9H869	796 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	TMEM184C	Q9NVA4	438 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	TMEM9	Q9P0T7	183 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	ATG4B	Q9Y4P1	393 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	ACACB	O00763	2458 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	TRBV5-4	A0A0C4DH59	114 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	C2orf72	A6NCS6	295 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	GABRR3	A8MPY1	467 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	NOL3	O60936	208 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	ALOX12B	O75342	701 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	C1QA	P02745	245 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	CDH2	P19022	906 aa	Predicted RBP	12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	MAOA	P21397	527 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	PEX19	P40855	299 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	IST1	P53990	364 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	KCNC3	Q14003	757 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	ZNF423	Q2M1K9	1284 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	BHLHB9	Q6PI77	547 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	SMARCD3	Q6STE5	483 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	LINC01555	Q8NAE3	123 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	IFI44	Q8TCB0	444 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	ZNF483	Q8TF39	744 aa	Predicted RBP	12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	STARD8	Q92502	1023 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	EXD2	Q9NVH0	621 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	VAPA	Q9P0L0	249 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	CXCR6	O00574	342 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	CASQ2	O14958	399 aa	Predicted RBP	12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	CHST10	O43529	356 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	WNT1	P04628	370 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	NUDT7	P0C024	238 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	PDCD11	Q14690	1871 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	GRM7	Q14831	915 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	DUOXA1	Q1HG43	343 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	KANK2	Q63ZY3	851 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	ZDHHC13	Q8IUH4	622 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	P3H2	Q8IVL5	708 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	CMKLR1	Q99788	373 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	POT1	Q9NUX5	634 aa		12.87	□□□□□ -0.35
DDR1-225	ENST00000376568	DEAF1	O75398	565 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	SCRG1	O75711	98 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	TRAPPC6A	O75865	159 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	HSMCR30	P0CW71	290 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	NOVA1	P51513	510 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	OR4D2	P58180	307 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	TAS2R41	P59536	307 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	GRHL2	Q6ISB3	625 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	PGAM4	Q8N0Y7	254 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	SLC22A18AS	Q8N1D0	253 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	AMER3	Q8N944	861 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	TNIP2	Q8NFZ5	429 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	PHOSPHO1	Q8TCT1	267 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	MRGBP	Q9NV56	204 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	AIG1	Q9NVV5	245 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568		A0A1W2PPC1	479 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	TTC36	A6NLP5	189 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	PGM3	O95394	542 aa		12.86	□□□□□ -0.35
DDR1-225	ENST00000376568	IFNA14	P01570	189 aa		12.86	□□□□□ -0.35

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