RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 NATD1Q8N6N6 113 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 OR51Q1Q8NH59 317 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 RP9Q8TA86 221 aaKnown RBP21.65■■□□□ 1.06
HLA-C-202ENST00000376237 CMTM5Q96DZ9 223 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 FAM122AQ96E09 287 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 TAS2R7Q9NYW3 318 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 HCN3Q9P1Z3 774 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 PSME2Q9UL46 239 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 EXO1Q9UQ84 846 aaKnown RBP21.65■■□□□ 1.06
HLA-C-202ENST00000376237 MRPS33Q9Y291 106 aaKnown RBP21.65■■□□□ 1.06
HLA-C-202ENST00000376237 TMEM184BQ9Y519 407 aaPredicted RBP21.65■■□□□ 1.06
HLA-C-202ENST00000376237 MAU2Q9Y6X3 613 aa21.65■■□□□ 1.06
HLA-C-202ENST00000376237 A0A1W2PNU3 283 aaPredicted RBP21.64■■□□□ 1.05
HLA-C-202ENST00000376237 GABRR3A8MPY1 467 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 MEN1O00255 615 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 EBAG9O00559 213 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 DNAJB6O75190 326 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 AIFM1O95831 613 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 COX7A2P14406 83 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 AGXTP21549 392 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 IL12AP29459 219 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 PRDX6P30041 224 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 RORAP35398 523 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 MC1RQ01726 317 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 NKAIN1Q4KMZ8 207 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 ARHGAP40Q5TG30 622 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 C1orf189Q5VU69 101 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 FOXR1Q6PIV2 292 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 C6orf89Q6UWU4 347 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 RIPOR1Q6ZS17 1223 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 MED25Q71SY5 747 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 OR8J2Q8NGG1 315 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 PPCDCQ96CD2 204 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 COQ8BQ96D53 544 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 OR1F2PQ96R84 312 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 RPF2Q9H7B2 306 aaKnown RBP21.64■■□□□ 1.05
HLA-C-202ENST00000376237 POLR1BQ9H9Y6 1135 aa21.64■■□□□ 1.05
HLA-C-202ENST00000376237 FAM149AA5PLN7 773 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 CYR61O00622 381 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 SNRPB2P08579 225 aaKnown RBP21.63■■□□□ 1.05
HLA-C-202ENST00000376237 ALDH9A1P49189 494 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 SHC2P98077 582 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 ACTN3Q08043 901 aaPredicted RBP21.63■■□□□ 1.05
HLA-C-202ENST00000376237 UGT8Q16880 541 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 CPTPQ5TA50 214 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 ZNF385CQ66K41 422 aaPredicted RBP21.63■■□□□ 1.05
HLA-C-202ENST00000376237 C18orf63Q68DL7 685 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 TREML1Q86YW5 311 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 PMEPA1Q969W9 287 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 TBC1D20Q96BZ9 403 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 TUBB6Q9BUF5 446 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 SLC25A23Q9BV35 468 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 MKKSQ9NPJ1 570 aaPredicted RBP21.63■■□□□ 1.05
HLA-C-202ENST00000376237 SH3BP4Q9P0V3 963 aa21.63■■□□□ 1.05
HLA-C-202ENST00000376237 SPTBP11277 2137 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 ZNF28P17035 718 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 S100A3P33764 101 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 KIR3DL1P43629 444 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 ZFP36L2P47974 494 aaKnown RBP21.62■■□□□ 1.05
HLA-C-202ENST00000376237 MAT1AQ00266 395 aaKnown RBP21.62■■□□□ 1.05
HLA-C-202ENST00000376237 STX5Q13190 355 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 COL9A2Q14055 689 aaPredicted RBP21.62■■□□□ 1.05
HLA-C-202ENST00000376237 CYLC2Q14093 348 aaPredicted RBP21.62■■□□□ 1.05
HLA-C-202ENST00000376237 FAM174BQ3ZCQ3 159 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 OR52E8Q6IFG1 317 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 SLC48A1Q6P1K1 146 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 TICAM1Q8IUC6 712 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 ZNF595Q8IYB9 648 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 TANKQ92844 425 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 SPDL1Q96EA4 605 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 PEX11GQ96HA9 241 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 TRPC4Q9UBN4 977 aa21.62■■□□□ 1.05
HLA-C-202ENST00000376237 CCDC154A6NI56 674 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 C9orf172C9J069 976 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 CLDN4O14493 209 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 NVLO15381 856 aaKnown RBP21.61■■□□□ 1.05
HLA-C-202ENST00000376237 CFLARO15519 480 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 RRP9O43818 475 aaKnown RBP21.61■■□□□ 1.05
HLA-C-202ENST00000376237 STK17BO94768 372 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 TNFSF15O95150 251 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 PGRP06401 933 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 ITGAXP20702 1163 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 PPP2R1BP30154 601 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 XCR1P46094 333 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 SPANXN4Q5MJ08 99 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 SAMD14Q8IZD0 417 aaPredicted RBP21.61■■□□□ 1.05
HLA-C-202ENST00000376237 VPS37AQ8NEZ2 397 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 OR7A2PQ8NGA2 310 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.61■■□□□ 1.05
HLA-C-202ENST00000376237 YIPF2Q9BWQ6 316 aa21.61■■□□□ 1.05
HLA-C-202ENST00000376237 BHLHE41Q9C0J9 482 aaPredicted RBP21.61■■□□□ 1.05
HLA-C-202ENST00000376237 LOC100653049A0A140TA62 436 aa21.6■■□□□ 1.05
HLA-C-202ENST00000376237 A0A1W2PP18 115 aa21.6■■□□□ 1.05
HLA-C-202ENST00000376237 PMS2P1A4D2B8 440 aa21.6■■□□□ 1.05
HLA-C-202ENST00000376237 NR5A2O00482 541 aa21.6■■□□□ 1.05
HLA-C-202ENST00000376237 KRT34O76011 436 aa21.6■■□□□ 1.05
HLA-C-202ENST00000376237 ALBP02768 609 aa21.6■■□□□ 1.05
HLA-C-202ENST00000376237 COX4I1P13073 169 aa21.6■■□□□ 1.05
HLA-C-202ENST00000376237 PUM1Q14671 1186 aaKnown RBP eCLIP21.6■■□□□ 1.05
HLA-C-202ENST00000376237 SYT16Q17RD7 645 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms