RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SPANXN2Q5MJ10 180 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 CEACAM20Q6UY09 585 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 LRRC56Q8IYG6 542 aaPredicted RBP13.88□□□□□ -0.19
MSH5-201ENST00000375703 FAM46DQ8NEK8 389 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 IL4I1Q96RQ9 567 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 CXorf36Q9H7Y0 433 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 CCDC177Q9NQR7 707 aaPredicted RBP13.88□□□□□ -0.19
MSH5-201ENST00000375703 MKLN1Q9UL63 735 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 PLXNA2O75051 1894 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 CARNS1A5YM72 827 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 C5orf58C9J3I9 102 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 KPNA3O00505 521 aaPredicted RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 RECKO95980 971 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 TP53BP2Q13625 1128 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 TRIM60Q495X7 471 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 DESI1Q6ICB0 168 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 TMIGD1Q6UXZ0 262 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 PARS2Q7L3T8 475 aaKnown RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 AKAP14Q86UN6 197 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 C2orf73Q8N5S3 287 aaPredicted RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 VN1R2Q8NFZ6 395 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 UBE2E3Q969T4 207 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 TXNDC15Q96J42 360 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 LRIG1Q96JA1 1093 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 TMCC3Q9ULS5 477 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 PCM1Q15154 2024 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 ABHD14A-ACY1A0A1B0GW23 586 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 ARRDC5A6NEK1 342 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 FAM227AF5H4B4 570 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 FFAR1O14842 300 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 PI15O43692 258 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 LILRB5O75023 590 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 HOXD12P35452 270 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 LIM2P55344 173 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 KRR1Q13601 381 aaKnown RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 BCL7AQ4VC05 210 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 RPS26P11Q5JNZ5 115 aaPredicted RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 ATAD3BQ5T9A4 648 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 DEPDC1Q5TB30 811 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 ZNF770Q6IQ21 691 aaPredicted RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 C19orf48Q6RUI8 117 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 ATCAYQ86WG3 371 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 SCAIQ8N9R8 606 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 HCAR2Q8TDS4 363 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 SETD7Q8WTS6 366 aaKnown RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 EFHD2Q96C19 240 aaPredicted RBP13.87□□□□□ -0.19
MSH5-201ENST00000375703 DTD2Q96FN9 168 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 PDXPQ96GD0 296 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 EHD3Q9NZN3 535 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 TBC1D14Q9P2M4 693 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 ICKQ9UPZ9 632 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 CFL2Q9Y281 166 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 WNT6Q9Y6F9 365 aa13.87□□□□□ -0.19
MSH5-201ENST00000375703 TRBV4-1A0A0J9YWV2 114 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 ANKDD1BA6NHY2 528 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 K7ESM1 405 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 ENTPD6O75354 484 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 ADH1AP07327 375 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 LEXMQ3ZCV2 418 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.86□□□□□ -0.19
MSH5-201ENST00000375703 IKBIPQ70UQ0 350 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 SLC38A5Q8WUX1 472 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 SLC35B4Q969S0 331 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 CAPNS2Q96L46 248 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 COQ10AQ96MF6 247 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 YME1L1Q96TA2 773 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 ZCCHC2Q9C0B9 1178 aaKnown RBP13.86□□□□□ -0.19
MSH5-201ENST00000375703 SPATA7Q9P0W8 599 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 KCND3Q9UK17 655 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 POU2F3Q9UKI9 436 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 CTDSP2O14595 271 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 SH3BP5O60239 455 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 POP7O75817 140 aaKnown RBP13.86□□□□□ -0.19
MSH5-201ENST00000375703 BCHEP06276 602 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 SLC15A1P46059 708 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 ALDH9A1P49189 494 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 MANFP55145 182 aaKnown RBP13.86□□□□□ -0.19
MSH5-201ENST00000375703 DEFA1P59665 94 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 DEFA3P59666 94 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 RPS26P62854 115 aaKnown RBP13.86□□□□□ -0.19
MSH5-201ENST00000375703 TNFAIP8L2Q6P589 184 aaPredicted RBP13.86□□□□□ -0.19
MSH5-201ENST00000375703 CCBE1Q6UXH8 406 aaPredicted RBP13.86□□□□□ -0.19
MSH5-201ENST00000375703 GDPD3Q7L5L3 318 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 VN1R5Q7Z5H4 357 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 SLC9B2Q86UD5 537 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 HORMAD2Q8N7B1 307 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 CEP19Q96LK0 163 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 IL17FQ96PD4 163 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 ACAT2Q9BWD1 397 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 UCK2Q9BZX2 261 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 C11orf16Q9NQ32 467 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 AHSPQ9NZD4 102 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 TSC22D4Q9Y3Q8 395 aa13.86□□□□□ -0.19
MSH5-201ENST00000375703 TLR4O00206 839 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 PSMD11O00231 422 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 ASNA1O43681 348 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 GPX5O75715 221 aa13.85□□□□□ -0.19
MSH5-201ENST00000375703 SNX4O95219 450 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms