RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TSPAN8P19075 237 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 CDH13P55290 713 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 DNAJB13P59910 316 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 RPS15AP62244 130 aaKnown RBP11.42□□□□□ -0.58
LSM2-208ENST00000375661 IRF8Q02556 426 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 XKR6Q5GH73 641 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 PLAG1Q6DJT9 500 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 FAAH2Q6GMR7 532 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 H3F3CQ6NXT2 135 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 CDH24Q86UP0 819 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 C10orf107Q8IVU9 208 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 EID3Q8N140 333 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 ANKRD53Q8N9V6 530 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 ACBD4Q8NC06 268 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 OR52B6Q8NGF0 335 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 METTL21AQ8WXB1 218 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 RERGQ96A58 199 aaPredicted RBP11.42□□□□□ -0.58
LSM2-208ENST00000375661 TM4SF19Q96DZ7 209 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 THAP11Q96EK4 314 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 PTCD3Q96EY7 689 aaKnown RBP11.42□□□□□ -0.58
LSM2-208ENST00000375661 AIF1LQ9BQI0 150 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 DRC3Q9H069 523 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 GSTO2Q9H4Y5 243 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 NT5DC2Q9H857 520 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 NOL11Q9H8H0 719 aaKnown RBP11.42□□□□□ -0.58
LSM2-208ENST00000375661 IPPKQ9H8X2 491 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 MCCC2Q9HCC0 563 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 C19orf25Q9UFG5 118 aaPredicted RBP11.42□□□□□ -0.58
LSM2-208ENST00000375661 MID2Q9UJV3 735 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 TINAGQ9UJW2 476 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 MKL2Q9ULH7 1088 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 ZNF490Q9ULM2 529 aaPredicted RBP11.42□□□□□ -0.58
LSM2-208ENST00000375661 H0YIG0 161 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 P2RX6O15547 441 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 FOXS1O43638 330 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 OR1F1O43749 312 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 TRIM13O60858 407 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 H2AFYO75367 372 aaKnown RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 SUPT7LO94864 414 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 STATHP02808 62 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 BPGMP07738 259 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 DHRS4L1P0CG22 281 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 ALDH3A1P30838 453 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 GRK3P35626 688 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 KIR3DL1P43629 444 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 PIK3CGP48736 1102 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 NAGLUP54802 743 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 SNRPNP63162 240 aaKnown RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 PMP22Q01453 160 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 ALDH6A1Q02252 535 aaKnown RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 CLCQ05315 142 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 TRAF3Q13114 568 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 RBBP5Q15291 538 aaKnown RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 NDUFA9Q16795 377 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 MEP1AQ16819 746 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 LIPMQ5VYY2 423 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 VN1R5Q7Z5H4 357 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 CPEB2Q7Z5Q1 589 aaKnown RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 ZC3H7AQ8IWR0 971 aaKnown RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 ARHGEF39Q8N4T4 335 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 L3MBTL4Q8NA19 623 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 TMEM178AQ8NBL3 297 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 FAM98AQ8NCA5 519 aaKnown RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 MDS2Q8NDY4 140 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 TRPC4APQ8TEL6 797 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 CCDC126Q96EE4 140 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 SCMH1Q96GD3 660 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 ATP6V1G3Q96LB4 118 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 TREX2Q9BQ50 279 aaPredicted RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 MACROD1Q9BQ69 325 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 EFCAB11Q9BUY7 163 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 MECRQ9BV79 373 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 NTMT1Q9BV86 223 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 GATA5Q9BWX5 397 aaPredicted RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 ACTR8Q9H981 624 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 KCNK9Q9NPC2 374 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 SEMA4BQ9NPR2 832 aaPredicted RBP11.41□□□□□ -0.58
LSM2-208ENST00000375661 ZNF225Q9UK10 706 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 RNF11Q9Y3C5 154 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 CCDC168Q8NDH2 2452 aa11.41□□□□□ -0.58
LSM2-208ENST00000375661 HCFC1P51610 2035 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 A0A0A6YYC8 382 aaPredicted RBP11.4□□□□□ -0.58
LSM2-208ENST00000375661 TMEM120BA0PK00 339 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 I3L1I5 382 aaPredicted RBP11.4□□□□□ -0.58
LSM2-208ENST00000375661 FFAR3O14843 346 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 TM9SF1O15321 606 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 GPR42O15529 346 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 UGDHO60701 494 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 ZWINTO95229 277 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 TBX6O95947 436 aaPredicted RBP11.4□□□□□ -0.58
LSM2-208ENST00000375661 CD46P15529 392 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 CD1EP15812 388 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 AVPR1BP47901 424 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 SERPINB4P48594 390 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 SLC18A1P54219 525 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 TLE4Q04727 773 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 LAPTM5Q13571 262 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 EXT1Q16394 746 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 HKDC1Q2TB90 917 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 ACER2Q5QJU3 275 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms