RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 DCAF4L2Q8NA75 395 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 C5orf34Q96MH7 638 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 HIST1H2AAQ96QV6 131 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 PSD2Q9BQI7 771 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF416Q9BWM5 594 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 FBXO8Q9NRD0 319 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 WASF3Q9UPY6 502 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 BLACEA4D250 179 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 J3KR12 359 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 CA5AP35218 305 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 DUSP4Q13115 394 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ENPP2Q13822 863 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 GPR135Q8IZ08 494 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 FANK1Q8TC84 345 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 OR2AG1Q9H205 316 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 CYB5R1Q9UHQ9 305 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 LAMP5Q9UJQ1 280 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF142P52746 1687 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 RBMXL2O75526 392 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 APOC3P02656 99 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 VAMP1P23763 118 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 IL12BP29460 328 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 PCGF2P35227 344 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 PRPS1P60891 318 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ARL9Q6T311 187 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 IGFN1Q86VF2 1251 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 OTUB2Q96DC9 234 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SECISBP2Q96T21 854 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SYT3Q9BQG1 590 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TTYH2Q9BSA4 534 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SLC22A11Q9NSA0 550 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 MYO18AQ92614 2054 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SIGLEC1Q9BZZ2 1709 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 COL1A1P02452 1464 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ANKRD33BA6NCL7 494 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 BOLA2-SMG1P6H3BVE0 249 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 H7C417 338 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 BCHEP06276 602 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ACPPP15309 386 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ADCYAP1R1P41586 468 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 GDI2P50395 445 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 CRYZQ08257 329 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF691Q5VV52 312 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 KIAA1211LQ6NV74 962 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 CEP68Q76N32 757 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF627Q7L945 461 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TMEM145Q8NBT3 493 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 OR6K6Q8NGW6 343 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 NEK7Q8TDX7 302 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TM6SF2Q9BZW4 377 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 NMUR1Q9HB89 426 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SNED1Q8TER0 1413 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 MEIOCA2RUB1 952 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 PRAMEF11O60813 436 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 DDOSTP39656 456 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 STT3AP46977 705 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ESCO2Q56NI9 601 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SLC2A7Q6PXP3 512 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 MTERF1Q99551 399 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ANKRD36CQ5JPF3 1778 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 RNASET2O00584 256 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 RGS6P49758 472 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SLC6A19Q695T7 634 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 NOXRED1Q6NXP6 359 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 FOXRED1Q96CU9 486 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SUSD3Q96L08 255 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 FCRL3Q96P31 734 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 UQCC2Q9BRT2 126 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 CHIAQ9BZP6 476 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 MINDY3Q9H8M7 445 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TMEM39AQ9NV64 488 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 YJEFN3A6XGL0 299 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 M0R129 80 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 PLSCR1O15162 318 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SPTLC1O15269 473 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 JUPP14923 745 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF460Q14592 562 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 EXOC3L2Q2M3D2 409 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TPRG1Q6ZUI0 275 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 KCTD20Q7Z5Y7 419 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 GPAT4Q86UL3 456 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TEX26Q8N6G2 289 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF709Q8N972 641 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 MUL1Q969V5 352 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SPIN2AQ99865 258 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SPIN2BQ9BPZ2 258 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 CRTAC1Q9NQ79 661 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SOHLH2Q9NX45 425 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 RPS17P08708 135 aaKnown RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 PRKACAP17612 351 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 OPRL1P41146 370 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 RIPOR3Q96MK2 946 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TTC34A8MYJ7 566 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 E2F3O00716 465 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TGOLN2O43493 480 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 MAOAP21397 527 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 CD79BP40259 229 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 NBPF12Q5TAG4 269 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SMARCD3Q6STE5 483 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 COMMD7Q86VX2 200 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms