RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MPPE1Q53F39 396 aa19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 LAS2Q8IYD9 372 aa19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 SRFBP1Q8NEF9 429 aaKnown RBP19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 PIH1D2Q8WWB5 315 aa19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 AP3S1Q92572 193 aa19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 KCTD7Q96MP8 289 aa19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 FAM193BQ96PV7 902 aaPredicted RBP19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 P2RY13Q9BPV8 354 aa19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 ALPK3Q96L96 1907 aa19.69■□□□□ 0.74
TMEFF1-201ENST00000374879 ARPC4-TTLL3A0A0A6YYG9 625 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 ZAR1LA6NP61 321 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 LINC01387J3KSC0 135 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 J3KTA2 159 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 ACSL4O60488 711 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 SYPP08247 313 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 ANXA3P12429 323 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 HLA-EP13747 358 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 STOMP27105 288 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 ERVK-21P61565 698 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 HSF2Q03933 536 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 AFTPHQ6ULP2 937 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 B3GALT6Q96L58 329 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 RBCK1Q9BYM8 510 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 FLRT1Q9NZU1 646 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 ZNF98A6NK75 572 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 MAGEB17A8MXT2 336 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 SGK494L7N484 410 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 IGHA2P01877 340 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 HRGP04196 525 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 EVX1P49640 407 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 PGFP49763 221 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 ZNF140P52738 457 aaPredicted RBP19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 VEZF1Q14119 521 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 GPR176Q14439 515 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 BHLHB9Q6PI77 547 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 BCDIN3DQ7Z5W3 292 aaKnown RBP19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 FOPNLQ96NB1 174 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 C11orf16Q9NQ32 467 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 SDHAF2Q9NX18 166 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 FTSJ1Q9UET6 329 aa19.68■□□□□ 0.74
TMEFF1-201ENST00000374879 TRAV6A0A075B6T7 132 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 MPZL2O60487 215 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 NBNO60934 754 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 ODC1P11926 461 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 SDC1P18827 310 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 FEN1P39748 380 aaKnown RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 TEX26Q8N6G2 289 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 TMEM163Q8TC26 289 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 TM9SF4Q92544 642 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 SAV1Q9H4B6 383 aaPredicted RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 CSNK1G1Q9HCP0 422 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 MAB21L2Q9Y586 359 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 GPR182O15218 404 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 GCM2O75603 506 aaPredicted RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 ZNF865P0CJ78 1059 aaPredicted RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 PCSK1P29120 753 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 SLC6A1P30531 599 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 KIR3DL1P43629 444 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 AVPR1BP47901 424 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 RPL6Q02878 288 aaKnown RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 TEAD4Q15561 434 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 CPSF6Q16630 551 aaKnown RBP eCLIP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 PAN2Q504Q3 1202 aaKnown RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 TIGD5Q53EQ6 642 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 USP30Q70CQ3 517 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 WDR53Q7Z5U6 358 aaPredicted RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 CLECL1Q8IZS7 167 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 SCAMP5Q8TAC9 235 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 C1GALT1C1Q96EU7 318 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 PARK7Q99497 189 aaKnown RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 PRR14Q9BWN1 585 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 GHITMQ9H3K2 345 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 NT5DC2Q9H857 520 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 FZD3Q9NPG1 666 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 LYARQ9NX58 379 aaKnown RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 COPS3Q9UNS2 423 aa19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 EXO1Q9UQ84 846 aaKnown RBP19.67■□□□□ 0.74
TMEFF1-201ENST00000374879 UPK3BL1B0FP48 263 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 UPK3BL2E5RIL1 263 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 PDYNP01213 254 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 CRISP1P54107 249 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 NCF4Q15080 339 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 GPR155Q7Z3F1 870 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 LUZP2Q86TE4 346 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 SLAIN1Q8ND83 568 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 FAM46DQ8NEK8 389 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 PROKR2Q8NFJ6 384 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 USP7Q93009 1102 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 SENP5Q96HI0 755 aaPredicted RBP19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 ZNF416Q9BWM5 594 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 ST3GAL5Q9UNP4 418 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 PRAMEF25A6NGN4 478 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 B3GALNT1O75752 331 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 ACPPP15309 386 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 RPS25P62851 125 aaKnown RBP19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 SELENOWP63302 87 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 CRYZQ08257 329 aaKnown RBP19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 ASB18Q6ZVZ8 466 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 RASGRP3Q8IV61 690 aa19.66■□□□□ 0.74
TMEFF1-201ENST00000374879 ADGRF3Q8IZF5 1079 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms