RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 GPAT3Q53EU6 434 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 Q5BKY6 102 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 TOR1AIP1Q5JTV8 583 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 CDKL4Q5MAI5 379 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 GCNT6Q5T4J0 391 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 OR5AK3PQ8NH89 298 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 WFDC5Q8TCV5 224 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 TAPBPLQ9BX59 468 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 BTNL2Q9UIR0 455 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 STOML2Q9UJZ1 356 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 RAB23Q9ULC3 237 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 CMAHPQ9Y471 501 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 MAP4K5Q9Y4K4 846 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SH3D21A4FU49 640 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 CPNE3O75131 537 aaKnown RBP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SOX14O95416 240 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 GBAP04062 536 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 CYP17A1P05093 508 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SCG5P05408 212 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 PCSK2P16519 638 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 DDX6P26196 483 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 CRISP1P54107 249 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 PSPHP78330 225 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 DOC2AQ14183 400 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SPHARQ15513 63 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 PDZK1Q5T2W1 519 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 ANXA8L1Q5VT79 327 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 KLHL17Q6TDP4 642 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SERPINA13PQ6UXR4 307 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 TRIM69Q86WT6 500 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 HJURPQ8NCD3 748 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 JPH3Q8WXH2 748 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 MAPKAP1Q9BPZ7 522 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SLC35A5Q9BS91 424 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 POLR2J2Q9GZM3 115 aaKnown RBP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SLA2Q9H6Q3 261 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SGK2Q9HBY8 427 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 ABCB9Q9NP78 766 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 ACER3Q9NUN7 267 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 ZNF282Q9UDV7 671 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 PRAMEF33A0A0G2JMD5 474 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 PRAMEF10O60809 474 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 CDRT1O95170 752 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 GASTP01350 101 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 MYL9P24844 172 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 GABRR2P28476 465 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 BMP8BP34820 402 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 PFN3P60673 137 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 HBA1P69905 142 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 SLC7A9P82251 487 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 CHRNEQ04844 493 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.59□□□□□ -0.71
CCDC40-203ENST00000374877 LRRC73Q5JTD7 316 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 FRMPD2BQ6IN97 320 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 SPRED2Q7Z698 418 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 GRPEL2Q8TAA5 225 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 DIRAS2Q96HU8 199 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 FCRL1Q96LA6 429 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 CITED4Q96RK1 184 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 PIP5K1AQ99755 562 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 C11orf54Q9H0W9 315 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-203ENST00000374877 NMNAT1Q9HAN9 279 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-203ENST00000374877 GPATCH2Q9NW75 528 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 DKK3Q9UBP4 350 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 OR6C70A6NIJ9 312 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 NPIPB8E9PQR5 432 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 CSO75390 466 aaKnown RBP10.59□□□□□ -0.71
CCDC40-203ENST00000374877 C6orf47O95873 294 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 IDSP22304 550 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 SSTR4P31391 388 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 HYAL2Q12891 473 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 LIPKQ5VXJ0 399 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 HS6ST3Q8IZP7 471 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 APCDD1Q8J025 514 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 TRIM63Q969Q1 353 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 TMEM203Q969S6 136 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 PBX4Q9BYU1 374 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 CD84Q9UIB8 345 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 FABP12A6NFH5 140 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 MPZL2O60487 215 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 AP2A2O94973 939 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 SOAT1P35610 550 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 ASMTP46597 345 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 RPS5P46782 204 aaKnown RBP10.59□□□□□ -0.71
CCDC40-203ENST00000374877 CDKN3Q16667 212 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 ZNF385BQ569K4 471 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 GAREM2Q75VX8 874 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 VN1R5Q7Z5H4 357 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 FAM46DQ8NEK8 389 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 OR9Q1Q8NGQ5 310 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 ENKURQ8TC29 256 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 RASSF5Q8WWW0 418 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 GEMIN6Q8WXD5 167 aaKnown RBP10.59□□□□□ -0.71
CCDC40-203ENST00000374877 PKP4Q99569 1192 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 SEC14L4Q9UDX3 406 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 SSR3Q9UNL2 185 aa10.59□□□□□ -0.71
CCDC40-203ENST00000374877 ZAR1LA6NP61 321 aa10.58□□□□□ -0.72
CCDC40-203ENST00000374877 FADS2P1A8MWK0 482 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms