RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 RSC1A1Q92681 617 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 CLDN23Q96B33 292 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 HSH2DQ96JZ2 352 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 BATF3Q9NR55 127 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 DNAJB9Q9UBS3 223 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 DOLKQ9UPQ8 538 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 ATG4BQ9Y4P1 393 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 ASB4Q9Y574 426 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 TMEM131Q92545 1883 aa16.02■□□□□ 0.16
PTPN20-203ENST00000374342 GON4LQ3T8J9 2241 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 A0A1W2PR48 441 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 OR5K3A6NET4 321 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 UPK1AO00322 258 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 GNGT2O14610 69 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 GUCY1B2O75343 617 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 NTSP30990 170 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 FRKP42685 505 aaPredicted RBP16.02■□□□□ 0.15
PTPN20-203ENST00000374342 TSFMP43897 325 aaKnown RBP16.02■□□□□ 0.15
PTPN20-203ENST00000374342 PRIM2P49643 509 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 CDK9P50750 372 aaKnown RBP16.02■□□□□ 0.15
PTPN20-203ENST00000374342 BTN3A2P78410 334 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 GK3PQ14409 553 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 TEAD4Q15561 434 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 GPR153Q6NV75 609 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 FBXO42Q6P3S6 717 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 ABCA7Q8IZY2 2146 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 OR2A5Q96R48 311 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 ZFYVE21Q9BQ24 234 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 C8orf4Q9NR00 106 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 UBAP1Q9NZ09 502 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 EHD3Q9NZN3 535 aa16.02■□□□□ 0.15
PTPN20-203ENST00000374342 SPAG17Q6Q759 2223 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 PRAMEF10O60809 474 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 PRSS23O95084 383 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 TYRP1P17643 537 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 RPS26P62854 115 aaKnown RBP16.01■□□□□ 0.15
PTPN20-203ENST00000374342 SCARB2Q14108 478 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 SPIDRQ14159 915 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 OTUD3Q5T2D3 398 aaPredicted RBP16.01■□□□□ 0.15
PTPN20-203ENST00000374342 FRMPD2BQ6IN97 320 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 ARMC6Q6NXE6 501 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 CBLL1Q75N03 491 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 EIF3MQ7L2H7 374 aaKnown RBP16.01■□□□□ 0.15
PTPN20-203ENST00000374342 VTCN1Q7Z7D3 282 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 IQCHQ86VS3 1027 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 ZDHHC21Q8IVQ6 265 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 CHERPQ8IWX8 916 aaKnown RBP16.01■□□□□ 0.15
PTPN20-203ENST00000374342 RBM12BQ8IXT5 1001 aaKnown RBP16.01■□□□□ 0.15
PTPN20-203ENST00000374342 UBALD2Q8IYN6 164 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 TMEFF1Q8IYR6 380 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 NFKBIDQ8NI38 313 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 EPS8L2Q9H6S3 715 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 SIRT3Q9NTG7 399 aaPredicted RBP16.01■□□□□ 0.15
PTPN20-203ENST00000374342 LYARQ9NX58 379 aaKnown RBP16.01■□□□□ 0.15
PTPN20-203ENST00000374342 DLGAP2Q9P1A6 1054 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 ZNF639Q9UID6 485 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 PADI4Q9UM07 663 aa16.01■□□□□ 0.15
PTPN20-203ENST00000374342 WASHC1A8K0Z3 465 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 SH3BP5O60239 455 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 ERAL1O75616 437 aaKnown RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 HOXB6P17509 224 aaKnown RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 RPS9P46781 194 aaKnown RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 CHN2P52757 468 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 IST1P53990 364 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 SNRPNP63162 240 aaKnown RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 SAXO2Q658L1 398 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 C18orf63Q68DL7 685 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 UGT2A3Q6UWM9 527 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 ISLR2Q6UXK2 745 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 SZRD1Q7Z422 152 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 GKN2Q86XP6 184 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 BAHD1Q8TBE0 780 aaPredicted RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 MAGEE2Q8TD90 523 aaPredicted RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 UTP15Q8TED0 518 aaKnown RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 RERGQ96A58 199 aaPredicted RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 TM4SF19Q96DZ7 209 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 NEURL3Q96EH8 262 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 TPD52L3Q96J77 140 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 BBS4Q96RK4 519 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 MAPKAP1Q9BPZ7 522 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 SLC35C2Q9NQQ7 365 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 ACSS1Q9NUB1 689 aaPredicted RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 TAS2R7Q9NYW3 318 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 PILRAQ9UKJ1 303 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 PCDHGB5Q9Y5G0 923 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 LOC105369274A0A096LPK9 316 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 LOC102723532A0A0G2JNH3 316 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 FKBP9O95302 570 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 GPC1P35052 558 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 MAGEA2P43356 314 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 CXCL12P48061 93 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 NCBP2P52298 156 aaKnown RBP eCLIP16■□□□□ 0.15
PTPN20-203ENST00000374342 DSTNP60981 165 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 RBBP4Q09028 425 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 COL9A2Q14055 689 aaPredicted RBP16■□□□□ 0.15
PTPN20-203ENST00000374342 LARP7Q4G0J3 582 aaKnown RBP eCLIP16■□□□□ 0.15
PTPN20-203ENST00000374342 CYBRD1Q53TN4 286 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 TBPL2Q6SJ96 375 aa16■□□□□ 0.15
PTPN20-203ENST00000374342 SLC36A4Q6YBV0 504 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms