RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 LIM2P55344 173 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 DSTNP60981 165 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 SOWAHCQ53LP3 525 aaPredicted RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 TANGO2Q6ICL3 276 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 UNC5DQ6UXZ4 953 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 RBM45Q8IUH3 476 aaKnown RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 GGHQ92820 318 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 PLEKHM1Q9Y4G2 1056 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 A0A1W2PPV9 198 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 SERPIND1P05546 499 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 HNRNPCP07910 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
CDK9-201ENST00000373264 HOXB3P14651 431 aaPredicted RBP22.68■■□□□ 1.22
CDK9-201ENST00000373264 FADDQ13158 208 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 LEXMQ3ZCV2 418 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 CRB2Q5IJ48 1285 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 DEPDC1Q5TB30 811 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 SETD7Q8WTS6 366 aaKnown RBP22.68■■□□□ 1.22
CDK9-201ENST00000373264 SLC38A5Q8WUX1 472 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 LZICQ8WZA0 190 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 DNAAF2Q9NVR5 837 aaKnown RBP22.68■■□□□ 1.22
CDK9-201ENST00000373264 M0R082 166 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 DNAJB5O75953 348 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 STSP08842 583 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 IFITM3Q01628 133 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 TCEA2Q15560 299 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 CYP2A13Q16696 494 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 CCDC80Q76M96 950 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 RTL10Q7L3V2 364 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 OR5K2Q8NHB8 316 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 SMARCD2Q92925 531 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 MS4A8Q9BY19 250 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 RNF167Q9H6Y7 350 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 PSORS1C1Q9UIG5 152 aa22.68■■□□□ 1.22
CDK9-201ENST00000373264 GASTP01350 101 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 IGFBP1P08833 259 aaPredicted RBP22.67■■□□□ 1.22
CDK9-201ENST00000373264 GRK5P34947 590 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 CCR3P51677 355 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 MANFP55145 182 aaKnown RBP22.67■■□□□ 1.22
CDK9-201ENST00000373264 RBBP4Q09028 425 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 PERM1Q5SV97 790 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 KRT78Q8N1N4 520 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 DNAJC22Q8N4W6 341 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 RHOXF1Q8NHV9 184 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 DYNC2LI1Q8TCX1 351 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 PIP5K1AQ99755 562 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 OSGEPL1Q9H4B0 414 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 ZBTB20Q9HC78 741 aaPredicted RBP22.67■■□□□ 1.22
CDK9-201ENST00000373264 COL4A3Q01955 1670 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 SNRNP200O75643 2136 aaKnown RBP22.67■■□□□ 1.22
CDK9-201ENST00000373264 SULT1C4O75897 302 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 DDCP20711 480 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 LRRC74AQ0VAA2 488 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 DOC2BQ14184 412 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 ZNF630Q2M218 657 aaPredicted RBP22.67■■□□□ 1.22
CDK9-201ENST00000373264 LRRTM4Q86VH4 590 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 AQP11Q8NBQ7 271 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 LGALS12Q96DT0 336 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 AKIP1Q9NQ31 210 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 THSD1Q9NS62 852 aa22.67■■□□□ 1.22
CDK9-201ENST00000373264 TRBV4-1A0A0J9YWV2 114 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 CA3P07451 260 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 OCM2P0CE71 109 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 OCMP0CE72 109 aaPredicted RBP22.66■■□□□ 1.22
CDK9-201ENST00000373264 ACP5P13686 325 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 MAPK11Q15759 364 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 METRNLQ641Q3 311 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 UBE3DQ7Z6J8 389 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 GPR32P1Q8NGA4 272 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 GEMIN6Q8WXD5 167 aaKnown RBP22.66■■□□□ 1.22
CDK9-201ENST00000373264 COX4I2Q96KJ9 171 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 ZNF347Q96SE7 839 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 NLNQ9BYT8 704 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 AICDAQ9GZX7 198 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 LMCD1Q9NZU5 365 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 ERGIC3Q9Y282 383 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 GLOD5A6NK44 160 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 SLC22A1O15245 554 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 OR1F1O43749 312 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 GADD45GO95257 159 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 PAK4O96013 591 aaPredicted RBP22.66■■□□□ 1.22
CDK9-201ENST00000373264 UQCRC2P22695 453 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 LIMS1P48059 325 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 SZRD1Q7Z422 152 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 ADCK2Q7Z695 626 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 CACTIN-AS1Q8N1I8 211 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 SVOPQ8N4V2 548 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 TMEM19Q96HH6 336 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 SERHL2Q9H4I8 314 aa22.66■■□□□ 1.22
CDK9-201ENST00000373264 BMP4P12644 408 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 GABRB1P18505 474 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 POU1F1P28069 291 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 FGL2Q14314 439 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 MLF2Q15773 248 aaPredicted RBP22.65■■□□□ 1.22
CDK9-201ENST00000373264 ADAMTSL4Q6UY14 1074 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 ZNF605Q86T29 641 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 COMTD1Q86VU5 262 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 UBE2E3Q969T4 207 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 PLA2G2FQ9BZM2 168 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 CCNB1IP1Q9NPC3 277 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms