RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CD83Q01151 205 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 UBAP2Q5T6F2 1119 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZC3HC1Q86WB0 502 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ALPK1Q96QP1 1244 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 PSKH2Q96QS6 385 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 PAPOLGQ9BWT3 736 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ERVK-18Q9QC07 812 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 CPSF4LA6NMK7 179 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 SYPP08247 313 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 POLR2CP19387 275 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 PREPP48147 710 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 PPP3R1P63098 170 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 CCINQ13939 588 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZCCHC12Q6PEW1 402 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 RELL1Q8IUW5 271 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 LGI4Q8N135 537 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 DNAJA4Q8WW22 397 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM203Q969S6 136 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ARHGAP9Q9BRR9 750 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 TBL1XR1Q9BZK7 514 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 TGIF2Q9GZN2 237 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 STATHP02808 62 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 CRISP3P54108 245 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 MAB21L1Q13394 359 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 C15orf39Q6ZRI6 1047 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC35F3Q8IY50 421 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 SORCS1Q8WY21 1168 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 CLCC1Q96S66 551 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC29A3Q9BZD2 475 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 GDE1Q9NZC3 331 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 GJD2Q9UKL4 321 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR6C65A6NJZ3 312 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 INMTO95050 263 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 F7P08709 466 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 CDKN2CP42773 168 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 SUOXP51687 545 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 AGTRAPQ6RW13 159 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ADIPOR1Q96A54 375 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZUFSPQ96AP4 578 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 NUDT9Q9BW91 350 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 THUMPD1Q9NXG2 353 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 TLX3O43711 291 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 KCNC3Q14003 757 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 DSC3Q14574 896 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF404Q494X3 552 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 KLHL6Q8WZ60 621 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 GLYATL1Q969I3 302 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ISOC1Q96CN7 298 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 CAMK1GQ96NX5 476 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 FAM86C1Q9NVL1 165 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 HRASLS2Q9NWW9 162 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 PCDHGB7Q9Y5F8 929 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR5K4A6NMS3 321 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 DLX3O60479 287 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 COQ9O75208 318 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 CREB5Q02930 508 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 FAM182AQ5T1J6 154 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 KIAA1161Q6NSJ0 714 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 NUP54Q7Z3B4 507 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 GOLGA7Q7Z5G4 137 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 APCDD1Q8J025 514 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 WDTC1Q8N5D0 677 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 CCDC107Q8WV48 283 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 TCEAL4Q96EI5 215 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC29A1Q99808 456 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 LGR4Q9BXB1 951 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 IGLON5A6NGN9 336 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF705GA8MUZ8 300 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 TPST2O60704 377 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 CHRM5P08912 532 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 GADD45AP24522 165 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 GRK6P43250 576 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 PITX1P78337 314 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 MRPS10P82664 201 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 FAM199XQ6PEV8 388 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM25Q86YD3 366 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZSCAN1Q8NBB4 408 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 FIBINQ8TAL6 211 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 IMP4Q96G21 291 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 DPAGT1Q9H3H5 408 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 MTMR10Q9NXD2 777 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 RIMKLBQ9ULI2 386 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 PCDHB3Q9Y5E6 796 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 NHSQ6T4R5 1651 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ENTPD6O75354 484 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ADAM8P78325 824 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ADAM15Q13444 863 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 GANABQ14697 944 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 TSTQ16762 297 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 MARCH8Q5T0T0 291 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 RTL10Q7L3V2 364 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ACBD4Q8NC06 268 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 PLA2G15Q8NCC3 412 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 GEMIN6Q8WXD5 167 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 C19orf12Q9NSK7 152 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms