RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NPAS3Q8IXF0 933 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 RPLP0P6Q8NHW5 317 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 FBP2O00757 339 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CTHP32929 405 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 DPP6P42658 865 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 COL28A1Q2UY09 1125 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 PRSS55Q6UWB4 352 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CACNA1CQ13936 2221 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 C8AP07357 584 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 ACTR1BP42025 376 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CASP6P55212 293 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 ACTR1AP61163 376 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 GHRHRQ02643 423 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 UBXN2BQ14CS0 331 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 FLYWCH1Q4VC44 716 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 VASH1Q7L8A9 365 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 KCNA7Q96RP8 456 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 KNTC1P50748 2209 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 PCM1Q15154 2024 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 LOC730098B7Z3J9 87 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 SOX1O00570 391 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CLEC3AO75596 197 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 HOXB9P17482 250 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 FPR1P21462 350 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 NKAPLQ5M9Q1 402 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF529Q6P280 563 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 TMEM125Q96AQ2 219 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 KATNBL1Q9H079 304 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CD93Q9NPY3 652 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 ICKQ9UPZ9 632 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 DHDHQ9UQ10 334 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 TEX264Q9Y6I9 313 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 FAM208AQ9UK61 1670 aaKnown RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 COL3A1P02461 1466 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 LDB2O43679 373 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 BCAS2O75934 225 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 SLC34A2O95436 690 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 HTR2BP41595 481 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 OR9I1Q8NGQ6 314 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 SLC5A11Q8WWX8 675 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 SLC28A3Q9HAS3 691 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 GALPQ9UBC7 116 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CACNG4Q9UBN1 327 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 NUFIP1Q9UHK0 495 aaKnown RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 A0A1W2PPK0 400 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 H2AFB2P0C5Z0 115 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 KCNJ11Q14654 390 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 NCBP2-AS2Q69YL0 99 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 TATDN1Q6P1N9 297 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 MARVELD2Q8N4S9 558 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CDKN2AIPNLQ96HQ2 116 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 TTYH3Q9C0H2 523 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 RNF11Q9Y3C5 154 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 GLOD5A6NK44 160 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 PPP1R11O60927 126 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 RBBP9O75884 186 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 IFNA5P01569 189 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 ADH5P11766 374 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 OR6N1Q8NGY5 312 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 SULT4A1Q9BR01 284 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 MYNNQ9NPC7 610 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 IFNA17P01571 189 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 AMY2BP19961 511 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 WDR4P57081 412 aaKnown RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 RPS24P62847 133 aaKnown RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 EVX2Q03828 476 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 PDSS1Q5T2R2 415 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 OR4E2Q8NGC2 313 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 ACDQ96AP0 544 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 CRTAC1Q9NQ79 661 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 MGAT4BQ9UQ53 548 aa12.01□□□□□ -0.49
HCFC1-202ENST00000369984 RP1L1Q8IWN7 2480 aaPredicted RBP12.01□□□□□ -0.49
HCFC1-202ENST00000369984 FAM159BA6NKW6 160 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 RGS9O75916 674 aaPredicted RBP12□□□□□ -0.49
HCFC1-202ENST00000369984 TRAM2Q15035 370 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 PIGGQ5H8A4 983 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 CILP2Q8IUL8 1156 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 SLC29A3Q9BZD2 475 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 CD244Q9BZW8 370 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 DERL2Q9GZP9 239 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
HCFC1-202ENST00000369984 GHRLQ9UBU3 117 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 RIPK3Q9Y572 518 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 TMEM63AO94886 807 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF616Q08AN1 781 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 OR51G2Q8NGK0 314 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 FAXDC2Q96IV6 333 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF599Q96NL3 588 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 PLEKHA3Q9HB20 300 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 MAN2C1Q9NTJ4 1040 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 C14orf119Q9NWQ9 140 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 ASB6Q9NWX5 421 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 OR6C74A6NCV1 312 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 C11orf98E9PRG8 122 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 CLDN7O95471 211 aa12□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF182P17025 639 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms