RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 CTAGE6Q86UF2 777 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 OTUD6BQ8N6M0 293 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 OR8K1Q8NGG5 319 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 PAQR8Q8TEZ7 354 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 TMEM171Q8WVE6 324 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 SPNS1Q9H2V7 528 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 CALHM2Q9HA72 323 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
VAMP4-202ENST00000367740 CRYL1Q9Y2S2 319 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 TENM1Q9UKZ4 2725 aa13.41□□□□□ -0.26
VAMP4-202ENST00000367740 MED12Q93074 2177 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 TRBC2A0A5B9 178 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 E5RI56 91 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 ZBTB14O43829 449 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 SMIM10L1P0DMW3 83 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 SOX18P35713 384 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 CPOXP36551 454 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 HNF4AP41235 474 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 HSD17B7P56937 341 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 MBOAT1Q6ZNC8 495 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 SYDE1Q6ZW31 735 aaPredicted RBP13.4□□□□□ -0.26
VAMP4-202ENST00000367740 STRA8Q7Z7C7 330 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 TMEM132CQ8N3T6 1108 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 ABHD11Q8NFV4 315 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 OR8K3Q8NH51 312 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 PTPMT1Q8WUK0 201 aaPredicted RBP13.4□□□□□ -0.26
VAMP4-202ENST00000367740 WDYHV1Q96HA8 205 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 SMIM10Q96HG1 83 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 JSRP1Q96MG2 331 aaPredicted RBP13.4□□□□□ -0.26
VAMP4-202ENST00000367740 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 CXorf56Q9H5V9 222 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 PRTFDC1Q9NRG1 225 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 ZNF226Q9NYT6 803 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 ZNF148Q9UQR1 794 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
VAMP4-202ENST00000367740 A8MXE2 369 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 SPRY1O43609 319 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-202ENST00000367740 NRDCO43847 1150 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 LRATO95237 230 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 MPC1LP0DKB6 136 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CCR8P51685 355 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CRADDP78560 199 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CCZ1BP86790 482 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CCZ1P86791 482 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-202ENST00000367740 SLC13A2Q13183 592 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 BBS9Q3SYG4 887 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 LCTLQ6UWM7 567 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 LYPD8Q6UX82 237 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CYHR1Q6ZMK1 362 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 UBE2R2Q712K3 238 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CLNKQ7Z7G1 428 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 MORN4Q8NDC4 146 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 OR4K1Q8NGD4 311 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 SLC44A1Q8WWI5 657 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 ROBO4Q8WZ75 1007 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 ZBED6CLQ96FA7 236 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-202ENST00000367740 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CHP1Q99653 195 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 SGPP1Q9BX95 441 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 UGT2B28Q9BY64 529 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 OR8D2Q9GZM6 311 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 AICDAQ9GZX7 198 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 HOMER3Q9NSC5 361 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 ZFP69BQ9UJL9 534 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CDC42EP3Q9UKI2 254 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 SLC6A5Q9Y345 797 aa13.39□□□□□ -0.27
VAMP4-202ENST00000367740 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-202ENST00000367740 GOLGA8KD6RF30 607 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 GOLGA8TH3BQL2 631 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 C1QAP02745 245 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 NPPBP16860 134 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 NMBRP28336 390 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 CCKARP32238 428 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 CTNNA1P35221 906 aaKnown RBP13.38□□□□□ -0.27
VAMP4-202ENST00000367740 SCTRP47872 440 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
VAMP4-202ENST00000367740 FAM27E3Q08E93 113 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 ASPHQ12797 758 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 PHKG1Q16816 387 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 MPEG1Q2M385 716 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 TTLL9Q3SXZ7 439 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 PIGGQ5H8A4 983 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 NHSL2Q5HYW2 709 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 PCID2Q5JVF3 399 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 C11orf63Q6NUN7 778 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 AGTRAPQ6RW13 159 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 PIWIL4Q7Z3Z4 852 aaKnown RBP13.38□□□□□ -0.27
VAMP4-202ENST00000367740 DAZLQ92904 295 aaKnown RBP13.38□□□□□ -0.27
VAMP4-202ENST00000367740 ALKBH8Q96BT7 664 aaKnown RBP13.38□□□□□ -0.27
VAMP4-202ENST00000367740 SPACA9Q96E40 222 aaPredicted RBP13.38□□□□□ -0.27
VAMP4-202ENST00000367740 ZFP3Q96NJ6 502 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 MED18Q9BUE0 208 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 PLA2G12AQ9BZM1 189 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 RBSNQ9H1K0 784 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 PIGMQ9H3S5 423 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 ETNK1Q9HBU6 452 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 INTUQ9ULD6 942 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms