RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 ZNF33BQ06732 778 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 ZNF805Q5CZA5 627 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 PARS2Q7L3T8 475 aaKnown RBP11.77□□□□□ -0.53
PTPN7-202ENST00000367279 RBM45Q8IUH3 476 aaKnown RBP11.77□□□□□ -0.53
PTPN7-202ENST00000367279 OR9A1PQ8NGU1 263 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 LMLNQ96KR4 655 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 RNF208Q9H0X6 261 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 CXorf36Q9H7Y0 433 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 PLCXD1Q9NUJ7 323 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 DDX28Q9NUL7 540 aaKnown RBP11.77□□□□□ -0.53
PTPN7-202ENST00000367279 CLEC2DQ9UHP7 191 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 PEX16Q9Y5Y5 336 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 TLR4O00206 839 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 TAF4O00268 1085 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 ARHGAP33O14559 1287 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 OXSR1O95747 527 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-202ENST00000367279 ADRA2AP08913 450 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 HNRNPFP52597 415 aaKnown RBP11.77□□□□□ -0.53
PTPN7-202ENST00000367279 PRKAG1P54619 331 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 TAB1Q15750 504 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 FBXO43Q4G163 708 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 PNCKQ6P2M8 343 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 CASP12Q6UXS9 341 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 TMIGD1Q6UXZ0 262 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 MEX3DQ86XN8 651 aaKnown RBP11.77□□□□□ -0.53
PTPN7-202ENST00000367279 CPA6Q8N4T0 437 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 IQCF1Q8N6M8 205 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 TMEM203Q969S6 136 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 CAPNS2Q96L46 248 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 WDR70Q9NW82 654 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 GULP1Q9UBP9 304 aa11.77□□□□□ -0.53
PTPN7-202ENST00000367279 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 CCRL2O00421 344 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 MMP20O60882 483 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 POP7O75817 140 aaKnown RBP11.76□□□□□ -0.53
PTPN7-202ENST00000367279 CXCL10P02778 98 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 SYN1P17600 705 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 PIK3CBP42338 1070 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 XCR1P46094 333 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TGM4P49221 684 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 MAPK12P53778 367 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 ZNF45Q02386 682 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TAP2Q03519 686 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 RBBP4Q09028 425 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 CNTN1Q12860 1018 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 PLPP4Q5VZY2 271 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 FRMPD2BQ6IN97 320 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 CNKSR3Q6P9H4 555 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 NXPE4Q6UWF7 544 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 HORMAD2Q8N7B1 307 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 CPNE5Q9HCH3 593 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 ANKHQ9HCJ1 492 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 SEMA3GQ9NS98 782 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 NUMA1Q14980 2115 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 HELZP42694 1942 aaKnown RBP11.76□□□□□ -0.53
PTPN7-202ENST00000367279 ISPDA4D126 451 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 A8MV72 311 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TFECO14948 347 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-202ENST00000367279 PTX3P26022 381 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-202ENST00000367279 CCDC92Q53HC0 331 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-202ENST00000367279 REEP3Q6NUK4 255 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TCEANCQ8N8B7 351 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 VN1R2Q8NFZ6 395 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 OR5AR1Q8NGP9 310 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 XAGE5Q8WWM1 108 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 CRELD1Q96HD1 420 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TMEM19Q96HH6 336 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 ASPNQ9BXN1 380 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 SP140LQ9H930 580 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TVP23BQ9NYZ1 205 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TAAR2Q9P1P5 351 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 TAC3Q9UHF0 121 aa11.76□□□□□ -0.53
PTPN7-202ENST00000367279 SLC28A2O43868 658 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 CCNKO75909 580 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 RHCEP18577 417 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 GPC1P35052 558 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 PNLIPRP1P54315 467 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 LIM2P55344 173 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 COPZ1P61923 177 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 TARDBPQ13148 414 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPN7-202ENST00000367279 PRAMEF14Q5SWL7 426 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 DCST1Q5T197 706 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 PRAMEF13Q5VWM6 474 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 FAM71E1Q6IPT2 247 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 ZNF367Q7RTV3 350 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 CAMKMTQ7Z624 323 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 GATAD2AQ86YP4 633 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 MAPKAP1Q9BPZ7 522 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 YIPF4Q9BSR8 244 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 HAT1O14929 419 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 KRT8P05787 483 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 ADH1AP07327 375 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 ARAFP10398 606 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 CTSAP10619 480 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 ALPPL2P10696 532 aa11.75□□□□□ -0.53
PTPN7-202ENST00000367279 RPL3P39023 403 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms