RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ITGA10O75578 1167 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TGFB1P01137 390 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PIK3CBP42338 1070 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ARFIP1P53367 373 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ALDH18A1P54886 795 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 IGLV3-21P80748 117 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 RBPJQ06330 500 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 RCN2Q14257 317 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 C3AR1Q16581 482 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 KHDRBS2Q5VWX1 349 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 LIPJQ5W064 366 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 METTL2BQ6P1Q9 378 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CHSY3Q70JA7 882 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SPPL2CQ8IUH8 684 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PLD6Q8N2A8 252 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TMEM132CQ8N3T6 1108 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 RNF175Q8N4F7 328 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CPSF7Q8N684 471 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TEX9Q8N6V9 391 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 FAM98AQ8NCA5 519 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 MORN4Q8NDC4 146 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SLC44A1Q8WWI5 657 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CMTM7Q96FZ5 175 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 C16orf45Q96MC5 204 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ALOXE3Q9BYJ1 711 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 COPS7BQ9H9Q2 264 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PSD3Q9NYI0 1048 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ADGRE2Q9UHX3 823 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 DCHS2Q6V1P9 2916 aa12.72□□□□□ -0.37
TNFRSF1A-202ENST00000366159 NCOA6Q14686 2063 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 NPIPA5E9PKD4 350 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 H0YIV9 168 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CCL21O00585 134 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 UGDHO60701 494 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 LDB3O75112 727 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZFAND5O76080 213 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 URI1O94763 535 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PHBP35232 272 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SERPINB8P50452 374 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ART3Q13508 389 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SERTAD2Q14140 314 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 PFKFB4Q16877 469 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TECRLQ5HYJ1 363 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 OR4C11Q6IEV9 310 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 C16orf47Q6ZP98 133 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 FGD2Q7Z6J4 655 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TICAM1Q8IUC6 712 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 SULF2Q8IWU5 870 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZNF321PQ8N8H1 164 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 L3MBTL4Q8NA19 623 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ZFP62Q8NB50 900 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 OR8K3Q8NH51 312 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 C16orf52Q8NHV5 167 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 HUS1BQ8NHY5 278 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 WDR20Q8TBZ3 569 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 DAZLQ92904 295 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 MRRFQ96E11 262 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 TSPAN10Q9H1Z9 355 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 OR51B5Q9H339 312 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CDC42EP4Q9H3Q1 356 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 DMRT3Q9NQL9 472 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 MYOTQ9UBF9 498 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 FBXW2Q9UKT8 454 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 NPIPA1Q9UND3 350 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 ENTPD4Q9Y227 616 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 KLF13Q9Y2Y9 288 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 KLF2Q9Y5W3 355 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 CACNA1DQ01668 2161 aa12.71□□□□□ -0.37
TNFRSF1A-202ENST00000366159 MYOCOSA0A1B0GUC4 107 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PLPP1O14494 284 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR2J2O76002 312 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MLYCDO95822 493 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PCNAP12004 261 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TYK2P29597 1187 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SSR4P51571 173 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 AP5B1Q2VPB7 878 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SP5Q6BEB4 398 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MRM1Q6IN84 353 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MTFR2Q6P444 385 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 BNC2Q6ZN30 1099 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CEP128Q6ZU80 1094 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GOLGA7Q7Z5G4 137 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZCCHC7Q8N3Z6 543 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF808Q8N4W9 903 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 POGLUT1Q8NBL1 392 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR14A16Q8NHC5 309 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF721Q8TF20 911 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TMEM125Q96AQ2 219 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RGMAQ96B86 450 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SORBS1Q9BX66 1292 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TSPYL1Q9H0U9 437 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 LIN28AQ9H9Z2 209 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DEPPQ9NTK1 212 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF358Q9NW07 568 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PPT2Q9UMR5 302 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms