RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 REXO4Q9GZR2 422 aaKnown RBP19.55■□□□□ 0.72
CD47-202ENST00000361309 IL1RL2Q9HB29 575 aa19.55■□□□□ 0.72
CD47-202ENST00000361309 CCM2LQ9NUG4 571 aaPredicted RBP19.55■□□□□ 0.72
CD47-202ENST00000361309 DNAJB12Q9NXW2 375 aaKnown RBP19.55■□□□□ 0.72
CD47-202ENST00000361309 VTI1BQ9UEU0 232 aa19.55■□□□□ 0.72
CD47-202ENST00000361309 Q9UFV3 132 aa19.55■□□□□ 0.72
CD47-202ENST00000361309 DAPP1Q9UN19 280 aa19.55■□□□□ 0.72
CD47-202ENST00000361309 CHMP2BQ9UQN3 213 aa19.55■□□□□ 0.72
CD47-202ENST00000361309 PPP2R2CQ9Y2T4 447 aa19.55■□□□□ 0.72
CD47-202ENST00000361309 ZNF354AO60765 605 aaPredicted RBP19.54■□□□□ 0.72
CD47-202ENST00000361309 CTNSO60931 367 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 CLEC3AO75596 197 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 CELA3AP09093 270 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 GSTM2P28161 218 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 ELK3P41970 407 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 SLC6A12P48065 614 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 DNASE1L1P49184 302 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 TSNQ15631 228 aaKnown RBP19.54■□□□□ 0.72
CD47-202ENST00000361309 ADPRMQ3LIE5 342 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 TRIM40Q6P9F5 258 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 FAM47EQ6ZV65 393 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 VN1R5Q7Z5H4 357 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 MYRIPQ8NFW9 859 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 OR14A16Q8NHC5 309 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 RHBDF1Q96CC6 855 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 PWWP2AQ96N64 755 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 FOXC2Q99958 501 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 CXXC4Q9H2H0 198 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 NT5DC2Q9H857 520 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 SACM1LQ9NTJ5 587 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 ACAD8Q9UKU7 415 aa19.54■□□□□ 0.72
CD47-202ENST00000361309 FLNAP21333 2647 aaKnown RBP19.54■□□□□ 0.72
CD47-202ENST00000361309 GOLGA6L10A0A0M3HER8 536 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ATP6AP2A0A1C7CYW4 349 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 SYNDIG1LA6NDD5 238 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ANKDD1BA6NHY2 528 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 AQP7O14520 342 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ATP6AP2O75787 350 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ADH7P40394 386 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 MAN2A2P49641 1150 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 MTTPP55157 894 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 RNF4P78317 190 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 FOLH1Q04609 750 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 FOXO1Q12778 655 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 STX4Q12846 297 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ADNP2Q6IQ32 1131 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ABHD17CQ6PCB6 329 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 FRA10AC1Q70Z53 315 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 LRRC8AQ8IWT6 810 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ZZZ3Q8IYH5 903 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 GOLM1Q8NBJ4 401 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 ANKRD49Q8WVL7 239 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 WDR83Q9BRX9 315 aaKnown RBP19.53■□□□□ 0.72
CD47-202ENST00000361309 LDAHQ9H6V9 325 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 COPS7BQ9H9Q2 264 aaPredicted RBP19.53■□□□□ 0.72
CD47-202ENST00000361309 CTNNAL1Q9UBT7 734 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 PSAT1Q9Y617 370 aa19.53■□□□□ 0.72
CD47-202ENST00000361309 FAM221AA4D161 298 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 NCF1BA6NI72 391 aaPredicted RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 NCF1CA8MVU1 366 aaPredicted RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 C17orf105B2RV13 164 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 SUSD5O60279 629 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 WDR1O75083 606 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 CTAG2O75638 210 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 P04436 131 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 CCL3P10147 92 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 NCF1P14598 390 aaPredicted RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 TNNI3P19429 210 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 HPDP32754 393 aaPredicted RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 SNTB1Q13884 538 aaKnown RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 RCN2Q14257 317 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 SLC10A1Q14973 349 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 EFTUD2Q15029 972 aaKnown RBP eCLIP19.52■□□□□ 0.72
CD47-202ENST00000361309 C1orf185Q5T7R7 199 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 WLSQ5T9L3 541 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 STEAP4Q687X5 459 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 OPN5Q6U736 354 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 ARSKQ6UWY0 536 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 ADAMTSL2Q86TH1 951 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 ZC3HC1Q86WB0 502 aaKnown RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 TGIF2LYQ8IUE0 185 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 OR8K3Q8NH51 312 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 SLC2A12Q8TD20 617 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 ACTRT1Q8TDG2 376 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 NINJ1Q92982 152 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 SGCZQ96LD1 299 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 CNPPD1Q9BV87 410 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 POLDIP3Q9BY77 421 aaKnown RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 LIME1Q9H400 295 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 SEMA4BQ9NPR2 832 aaPredicted RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 ALKBH4Q9NXW9 302 aa19.52■□□□□ 0.72
CD47-202ENST00000361309 TUBA8Q9NY65 449 aaPredicted RBP19.52■□□□□ 0.72
CD47-202ENST00000361309 FAM95CA0A1B0GW59 222 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 LDB3O75112 727 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 TAS2R39P59534 338 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 HYAL4Q2M3T9 481 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 SLC25A35Q3KQZ1 300 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 WDR53Q7Z5U6 358 aaPredicted RBP19.51■□□□□ 0.71
CD47-202ENST00000361309 PDIK1LQ8N165 341 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 CHDHQ8NE62 594 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms