RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 GNSP15586 552 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 SERPINB1P30740 379 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 DHPSP49366 369 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 RPS13P62277 151 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 ACSM2AQ08AH3 577 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 ZC3H12BQ5HYM0 836 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 ACSM2BQ68CK6 577 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 PMS2CLQ68D20 193 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 XAF1Q6GPH4 301 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 SPESP1Q6UW49 350 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 ZC3H7AQ8IWR0 971 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 CHDHQ8NE62 594 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 SLC37A2Q8TED4 501 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 NUDT8Q8WV74 236 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 ITCHQ96J02 903 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 MBOAT4Q96T53 435 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 TBCDQ9BTW9 1192 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 RUVBL1Q9Y265 456 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 MAGED1Q9Y5V3 778 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 IGKV1-8A0A0C4DH67 115 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 LOC100130705A0A1B0GUX0 176 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 A0A1B0GVT2 93 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 MAGEB3O15480 346 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 HS6ST1O60243 411 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 SDC3O75056 442 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 BCKDHAP12694 445 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 ACPPP15309 386 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 ZNF182P17025 639 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 AMD1P17707 334 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 S100A3P33764 101 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 RYKP34925 604 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 CLDN8P56748 225 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 KCNAB2Q13303 367 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 GPR18Q14330 331 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 SPIN4Q56A73 249 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 LYSMD4Q5XG99 296 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 SDR16C5Q8N3Y7 309 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 FAM86B1Q8N7N1 296 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 BPIFB6Q8NFQ5 453 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 OR4K1Q8NGD4 311 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 NELL1Q92832 810 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 APIPQ96GX9 242 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 APOLD1Q96LR9 279 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 RAD21L1Q9H4I0 556 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 KAT8Q9H7Z6 458 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 NT5DC2Q9H857 520 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 DMRT3Q9NQL9 472 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 SLC25A37Q9NYZ2 338 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 WARS2Q9UGM6 360 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 A0A096LPI6 279 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 B4DGG1 531 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 BTN3A3O00478 584 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 NOBOXO60393 691 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 FOXD2O60548 495 aaPredicted RBP12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 CLPXO76031 633 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 ETHE1O95571 254 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 ZBTB11O95625 1053 aaPredicted RBP12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 CD247P20963 164 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 PTX3P26022 381 aaPredicted RBP12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 UBE2IP63279 158 aaKnown RBP12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 REEP5Q00765 189 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 BNC1Q01954 994 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 VAC14Q08AM6 782 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 KIR2DS3Q14952 304 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 MEP1AQ16819 746 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 LRIF1Q5T3J3 769 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 NOXRED1Q6NXP6 359 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 ZNF761Q86XN6 746 aaPredicted RBP12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 MSRB3Q8IXL7 192 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 ARL10Q8N8L6 244 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 DTWD2Q8NBA8 298 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 OR2L3Q8NG85 312 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 SNRNP27Q8WVK2 155 aaKnown RBP12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 PYURFQ96I23 114 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 AMBRA1Q9C0C7 1298 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 TMEM184CQ9NVA4 438 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 UCKL1Q9NWZ5 548 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 BAG5Q9UL15 447 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 B3GNT3Q9Y2A9 372 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 MAN2B2Q9Y2E5 1009 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 FAM221BA6H8Z2 402 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 TMX2-CTNND1H3BSU7 103 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 SLC16A6O15403 523 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 AQP9O43315 295 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 CCDC159P0C7I6 412 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 IL7RP16871 459 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 ITIH1P19827 911 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 DCTP40126 519 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 BMXP51813 675 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 PLA2G16P53816 162 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 CSNK1G2P78368 415 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 HHEXQ03014 270 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 SPIDRQ14159 915 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 NKG7Q16617 165 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 PLK5Q496M5 336 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms