RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IL7RP16871 459 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CD22P20273 847 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CYP2A7P20853 494 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 PRKACGP22612 351 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 RYKP34925 604 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ENTPD1P49961 510 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 PER3P56645 1201 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 WNT3P56703 355 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 DCDC1P59894 354 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SLC13A2Q13183 592 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 KCNC3Q14003 757 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 LRRC73Q5JTD7 316 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ZNF691Q5VV52 312 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 LIPJQ5W064 366 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 NOXRED1Q6NXP6 359 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SHQ1Q6PI26 577 aaKnown RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TEPPQ6URK8 271 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SPESP1Q6UW49 350 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GDPD4Q6W3E5 623 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C1orf122Q6ZSJ8 110 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 KANSL1Q7Z3B3 1105 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TMEM25Q86YD3 366 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ELMOD1Q8N336 334 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ZNF555Q8NEP9 628 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 OR2A12Q8NGT7 310 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 WDR20Q8TBZ3 569 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 MCOLN3Q8TDD5 553 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SNX19Q92543 992 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SGCDQ92629 289 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TANKQ92844 425 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FBXL8Q96CD0 374 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 DCUN1D5Q9BTE7 237 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GABARAPL1Q9H0R8 117 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FANCEQ9HB96 536 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 PLGRKTQ9HBL7 147 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SLC25A13Q9UJS0 675 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C3orf18Q9UK00 162 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 NAALAD2Q9Y3Q0 740 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 HELZP42694 1942 aaKnown RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 RFXANKO14593 260 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 AP2A2O94973 939 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 CD8BP10966 210 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ZNF30P17039 623 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 GPX2P18283 190 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 PRPS1L1P21108 318 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 EEF1B2P24534 225 aaKnown RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 CCR2P41597 374 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 TRPC1P48995 793 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 POLR2LP62875 67 aaKnown RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 CD47Q08722 323 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 CHIT1Q13231 466 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 IL18R1Q13478 541 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 MEP1AQ16819 746 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 DUOXA1Q1HG43 343 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 OR4F3Q6IEY1 312 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 DOK6Q6PKX4 331 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 OTOP2Q7RTS6 562 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 HSD11B1LQ7Z5J1 315 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ADIPOR2Q86V24 386 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 HIPK1Q86Z02 1210 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 KLHDC8AQ8IYD2 350 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 STPG3Q8N7X2 389 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 TBC1D15Q8TC07 691 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 NCLNQ969V3 563 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 APOLD1Q96LR9 279 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ALPK1Q96QP1 1244 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 SSBP4Q9BWG4 385 aaPredicted RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 LHPPQ9H008 270 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 GPN2Q9H9Y4 310 aaPredicted RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 IL1RAPQ9NPH3 570 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 SPATA6Q9NWH7 488 aaPredicted RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 VNN3Q9NY84 501 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 PLXNA2O75051 1894 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 MTX2O75431 263 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 PSIP1O75475 530 aaKnown RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 LRATO95237 230 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 KCNK5O95279 499 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ITGAMP11215 1152 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 NKX6-1P78426 367 aaPredicted RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 PRR5P85299 388 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 NFATC3Q12968 1075 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 PPP1R8Q12972 351 aaKnown RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 ABRQ12979 859 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 CSTF3Q12996 717 aaKnown RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 ARHGEF6Q15052 776 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 RFX4Q33E94 735 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 EMC4Q5J8M3 183 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ANKRD26P1Q6NSI1 321 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 KLHL35Q6PF15 583 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 BRAT1Q6PJG6 821 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 CD300LDQ6UXZ3 194 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 RNF175Q8N4F7 328 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ARL10Q8N8L6 244 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 OR8J2Q8NGG1 315 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 SKA2Q8WVK7 121 aaPredicted RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 SCAMP4Q969E2 229 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 FKBP10Q96AY3 582 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ZNF775Q96BV0 537 aaPredicted RBP7□□□□□ -1.29
CLCN3-202ENST00000360642 ATG10Q9H0Y0 220 aa7□□□□□ -1.29
CLCN3-202ENST00000360642 ADNPQ9H2P0 1102 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms