RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PHF19Q5T6S3 580 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 ZDHHC1Q8WTX9 485 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 NUS1Q96E22 293 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CDK15Q96Q40 435 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 TSSK6Q9BXA6 273 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 NMUR1Q9HB89 426 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 TAS2R8Q9NYW2 309 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PRODH2Q9UF12 536 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CHD2O14647 1828 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 OPN1SWP03999 348 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 GNB3P16520 340 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PNCKQ6P2M8 343 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 MON1BQ7L1V2 547 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 OR10Q1Q8NGQ4 319 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PTPN18Q99952 460 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 ZIM2Q9NZV7 527 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 RNF225M0QZC1 329 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PCDH17O14917 1159 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CREG1O75629 220 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 ADH7P40394 386 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PIGFQ07326 219 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 POU4F3Q15319 338 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 C22orf42Q6IC83 251 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 DNAJC19Q96DA6 116 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF223Q9UK11 482 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 NPIPA2E9PIF3 369 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 NPIPA3F8WFD2 350 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 AHSA1O95433 338 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 FPR1P21462 350 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 GNRHRP30968 328 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PRKAR1BP31321 381 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 ARSFP54793 590 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 DSTNP60981 165 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CYCSP99999 105 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 DBPQ10586 325 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CDNFQ49AH0 187 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PURBQ96QR8 312 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 WRAP53Q9BUR4 548 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 A0A1B0GVT2 93 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 KRBA1A5PL33 1030 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 MFSD13AQ14CX5 517 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 MLIPQ5VWP3 458 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 MAN2C1Q9NTJ4 1040 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 SCGB1D1O95968 90 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 CD3GP09693 182 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 SNTB2Q13425 540 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ALPK1Q96QP1 1244 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 IL17RBQ9NRM6 502 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 PCTPQ9UKL6 214 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF536O15090 1300 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 WNT9AO14904 365 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ADCYAP1R1P41586 468 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 PTPRRQ15256 657 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 HGSNATQ68CP4 663 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 UGT2A3Q6UWM9 527 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 GSG1LQ6UXU4 331 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 HSH2DQ96JZ2 352 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 RBCK1Q9BYM8 510 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 NME7Q9Y5B8 376 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 LMTK2Q8IWU2 1503 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 A0A0A6YYH2 397 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 A6NJ64 397 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ARPC5O15511 151 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 TFP02787 698 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 RETP07949 1114 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 BMP4P12644 408 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 IL17AQ16552 155 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ERN2Q76MJ5 926 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 TICAM1Q8IUC6 712 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 PMEPA1Q969W9 287 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 RDH12Q96NR8 316 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 DIDO1Q9BTC0 2240 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ECI2O75521 394 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 SNAPINO95295 136 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 OXTRP30559 389 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 TNFSF9P41273 254 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 CAP1Q01518 475 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 EPGNQ6UW88 154 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 NAXEQ8NCW5 288 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF436Q9C0F3 470 aaPredicted RBP12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 EFCAB7A8K855 629 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 A8MXE2 369 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 TNFSF4P23510 183 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 HRH2P25021 359 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 SKA3Q8IX90 412 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 OR7G1Q8NGA0 311 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 HOXB13Q92826 284 aaPredicted RBP12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 ZDHHC2Q9UIJ5 367 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 PPLO60437 1756 aa12.74□□□□□ -0.37
SRGAP3-201ENST00000360413 TRBC2A0A5B9 178 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ACOT7O00154 380 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 PROS1P07225 676 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 LAPTM4AQ15012 233 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OR6Q1Q8NGQ2 317 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms