RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 SPACA6W5XKT8 324 aa20.69■□□□□ 0.9
HOXA4-201ENST00000360046 COL27A1Q8IZC6 1860 aaPredicted RBP20.69■□□□□ 0.9
HOXA4-201ENST00000360046 HYAL3O43820 417 aaPredicted RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 NSA2O95478 260 aaKnown RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 NR2F6P10588 404 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 EFNA1P20827 205 aaPredicted RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 ALAS2P22557 587 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 PLA2G5P39877 138 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 TNFRSF17Q02223 184 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 ACTN3Q08043 901 aaPredicted RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 DNAL1Q4LDG9 190 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 C16orf89Q6UX73 402 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 GLRX5Q86SX6 157 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 SLCO6A1Q86UG4 719 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 UCN3Q969E3 161 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 ROPN1LQ96C74 230 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 FAM122AQ96E09 287 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 MMABQ96EY8 250 aaPredicted RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 NPLQ9BXD5 320 aaPredicted RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 BHLHE41Q9C0J9 482 aaPredicted RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 WDR41Q9HAD4 459 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 ENAMQ9NRM1 1142 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 GID8Q9NWU2 228 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 FAM120CQ9NX05 1096 aaKnown RBP20.68■□□□□ 0.9
HOXA4-201ENST00000360046 MS4A12Q9NXJ0 267 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 NDE1Q9NXR1 346 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 KCMF1Q9P0J7 381 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 HCN3Q9P1Z3 774 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 PCDHA9Q9Y5H5 950 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 DMXL1Q9Y485 3027 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 GVINP1Q7Z2Y8 2422 aa20.68■□□□□ 0.9
HOXA4-201ENST00000360046 C1orf226A1L170 272 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 EFCAB7A8K855 629 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 ZNF749O43361 778 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 ATXN8OSP0DMR3 200 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 DDX5P17844 614 aaKnown RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 FAM180BQ6P0A1 224 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 MSANTD1Q6ZTZ1 278 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 DHDDSQ86SQ9 333 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 DEFB107AQ8IZN7 70 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 CA13Q8N1Q1 262 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 FAM47BQ8NA70 645 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 VPS37AQ8NEZ2 397 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 CIDECQ96AQ7 238 aaPredicted RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 EXOSC8Q96B26 276 aaKnown RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 ITCHQ96J02 903 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 CSF3RQ99062 836 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 SLC7A5P2Q9GIP4 190 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 DHCR7Q9UBM7 475 aaKnown RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 PCNX2A6NKB5 2137 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 CSRP1P21291 193 aaKnown RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 TLX1P31314 330 aaPredicted RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 ARSFP54793 590 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 WNT3P56703 355 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 SIM1P81133 766 aaPredicted RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 SHC2P98077 582 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 PRSS53Q2L4Q9 553 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 TRMT5Q32P41 509 aaKnown RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 ANXA8L1Q5VT79 327 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 DNAJC14Q6Y2X3 702 aaPredicted RBP20.67■□□□□ 0.9
HOXA4-201ENST00000360046 DPP10Q8N608 796 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 GTF2H4Q92759 462 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 SLC39A3Q9BRY0 314 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 EHD3Q9NZN3 535 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 SLAMF8Q9P0V8 285 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 CROTQ9UKG9 612 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 UTS2RQ9UKP6 389 aa20.67■□□□□ 0.9
HOXA4-201ENST00000360046 SCN2AQ99250 2005 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 PGRMC2O15173 223 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 CHST10O43529 356 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 TBX19O60806 448 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 KCNH1O95259 989 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 CCKBRP32239 447 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 HACD2Q6Y1H2 254 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 TMEM126BQ8IUX1 230 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 MCUR1Q96AQ8 359 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 RNF31Q96EP0 1072 aa20.66■□□□□ 0.9
HOXA4-201ENST00000360046 AKAP7Q9P0M2 348 aaPredicted RBP20.66■□□□□ 0.9
HOXA4-201ENST00000360046 FAM186AA6NE01 2351 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 PRSS51A0A1B0GVH4 220 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 WASHC1A8K0Z3 465 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 PDPK1O15530 556 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 MT-CO3P00414 261 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 FTH1P19P0C7X4 201 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 MAT1AQ00266 395 aaKnown RBP20.65■□□□□ 0.9
HOXA4-201ENST00000360046 CAPRIN1Q14444 709 aaKnown RBP20.65■□□□□ 0.9
HOXA4-201ENST00000360046 YOD1Q5VVQ6 348 aaPredicted RBP20.65■□□□□ 0.9
HOXA4-201ENST00000360046 CYB5D1Q6P9G0 228 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 PPP1R3BQ86XI6 285 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 CLECL1Q8IZS7 167 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 PGAM4Q8N0Y7 254 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 MIEF2Q96C03 454 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 LRRC58Q96CX6 371 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 ZNF764Q96H86 408 aaPredicted RBP20.65■□□□□ 0.9
HOXA4-201ENST00000360046 PANX1Q96RD7 426 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 INPP5KQ9BT40 448 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 STRADBQ9C0K7 418 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 SERHLQ9NQF3 203 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 SRPK3Q9UPE1 567 aa20.65■□□□□ 0.9
HOXA4-201ENST00000360046 MAU2Q9Y6X3 613 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms