RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 UCK2Q9BZX2 261 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 KCTD5Q9NXV2 234 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ELF5Q9UKW6 265 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 VPS4AQ9UN37 437 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 IRGMA1A4Y4 181 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 C5orf67F2Z3F1 127 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 SCAMP2O15127 329 aaKnown RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 SLC16A5O15375 505 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 FZD6O60353 706 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 GCM2O75603 506 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 GALTP07902 379 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ADRA2AP08913 450 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CPEP16870 476 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CTRB1P17538 263 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ITGALP20701 1170 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CFL1P23528 166 aaKnown RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 IRS1P35568 1242 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 AFF1P51825 1210 aaKnown RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CTAG1AP78358 180 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 SF3A2Q15428 464 aaKnown RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 GPR33Q49SQ1 333 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CRB2Q5IJ48 1285 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 FRG2Q64ET8 278 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CTRB2Q6GPI1 263 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 NCEH1Q6PIU2 408 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 CHST9Q7L1S5 443 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 TMCO2Q7Z6W1 182 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 SERPINA9Q86WD7 417 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 PHC2Q8IXK0 858 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 DIRAS2Q96HU8 199 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 APOLD1Q96LR9 279 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 FRG2BQ96QU4 278 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 FAM129BQ96TA1 746 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 PAAF1Q9BRP4 392 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 APOL5Q9BWW9 433 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 PBX4Q9BYU1 374 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 FOLH1BQ9HBA9 442 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 RLIMQ9NVW2 624 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 TAS2R16Q9NYV7 291 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 ZMAT5Q9UDW3 170 aaKnown RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 KCND3Q9UK17 655 aa10.19□□□□□ -0.78
CAPN3-205ENST00000357568 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-205ENST00000357568 A0A1W2PQL4 384 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 LINC01553A4QN01 128 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 RNASET2O00584 256 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 CDK2AP1O14519 115 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 SLC25A14O95258 325 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 C8GP07360 202 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 LINC00271P0C7V0 271 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 HLA-EP13747 358 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 JUPP14923 745 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 DDX5P17844 614 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 RHCEP18577 417 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 HK1P19367 917 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 AZGP1P25311 298 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 CDH12P55289 794 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ERVK-21P61565 698 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 SP140Q13342 867 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ILKQ13418 452 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 CPSF6Q16630 551 aaKnown RBP eCLIP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TOR2AQ5JU69 321 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 C12orf73Q69YU5 71 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 BICRALQ6AI39 1079 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 GALNT10Q86SR1 603 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 GLRX5Q86SX6 157 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 CIR1Q86X95 450 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF280BQ86YH2 543 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 SCN4BQ8IWT1 228 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 BBS7Q8IWZ6 715 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 C19orf18Q8NEA5 215 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM163Q8TC26 289 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 CREB3L1Q96BA8 519 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 DPH2Q9BQC3 489 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 AIFM2Q9BRQ8 373 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 DUSP26Q9BV47 211 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 PPP1R3EQ9H7J1 279 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TRIM45Q9H8W5 580 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ACER3Q9NUN7 267 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 GLTPQ9NZD2 209 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ENPP4Q9Y6X5 453 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 GRXCR1A8MXD5 290 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 H3BNC9 293 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TLR5O60602 858 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 CLDN11O75508 207 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TNFRSF21O75509 655 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 RFPL3O75679 317 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 OAZ2O95190 189 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 B3GALT4O96024 378 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 NAGAP17050 411 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 SLC11A1P49279 550 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 MRPL28Q13084 256 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 EIF2B5Q13144 721 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 PYDC2Q56P42 97 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 LIPJQ5W064 366 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TRIQKQ629K1 86 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 FAM109BQ6ICB4 259 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF770Q6IQ21 691 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF783Q6ZMS7 281 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 SLC39A11Q8N1S5 342 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms