RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 AQP4P55087 323 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SELENOVP59797 346 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 DCDC1P59894 354 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CDK10Q15131 360 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CYB561A3Q8NBI2 242 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 OR5J2Q8NH18 312 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 DNAJA4Q8WW22 397 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 FBXL8Q96CD0 374 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZDHHC12Q96GR4 267 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 OR6C1Q96RD1 312 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SMOC1Q9H4F8 434 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SHISA7A6NL88 538 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ETFAP13804 333 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 GPR85P60893 370 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF585AQ6P3V2 769 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 OLIG3Q7RTU3 272 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ASB15Q8WXK1 588 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 IRGQQ8WZA9 623 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 NODALQ96S42 347 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CXCL16Q9H2A7 254 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 TPT1P8Q9HAU6 139 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 TRPS1Q9UHF7 1281 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 DUSP13Q9UII6 198 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 MAGEL2Q9UJ55 1249 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 C15orf41Q9Y2V0 281 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SIT1Q9Y3P8 196 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ARHGEF5Q12774 1597 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 WASHC1A8K0Z3 465 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 WDPCPO95876 746 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 P04436 131 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 EIF2S3LQ2VIR3 472 aaKnown RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 WASH2PQ6VEQ5 465 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 OR6C4Q8NGE1 309 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PLEKHO2Q8TD55 490 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 H1FXQ92522 213 aaKnown RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF334Q9HCZ1 680 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 A8MVJ9 347 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 GRIN2CQ14957 1233 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 OR7A5Q15622 319 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SMG8Q8ND04 991 aaKnown RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 OR4K13Q8NH42 304 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SPRYD4Q8WW59 207 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SAR1AQ9NR31 198 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PITPNM1O00562 1244 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 MAFKO60675 156 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 STC2O76061 302 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 LCKP06239 509 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CPMP14384 443 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 GNB3P16520 340 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CXCL12P48061 93 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PLCXD2Q0VAA5 305 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 FUT2Q10981 343 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ALG10Q5BKT4 473 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CRB3Q9BUF7 120 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SACM1LQ9NTJ5 587 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 OAZ3Q9UMX2 235 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF850A8MQ14 1090 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 UNGP13051 313 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 AKR1C4P17516 323 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF750Q32MQ0 723 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PAQR7Q86WK9 346 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PKP2Q99959 881 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 DEFB127Q9H1M4 99 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ACSS3Q9H6R3 686 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PSAT1Q9Y617 370 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 EFSO43281 561 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 GABBR2O75899 941 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CYP17A1P05093 508 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 IGFBP6P24592 240 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PTX3P26022 381 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 GDF1P27539 372 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 GPR157Q5UAW9 335 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 IL1F10Q8WWZ1 152 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 UFD1Q92890 307 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CIDECQ96AQ7 238 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SLC6A15Q9H2J7 730 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF576Q9H609 170 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PTGES2Q9H7Z7 377 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ENY2Q9NPA8 101 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SLC39A1Q9NY26 324 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 TMCO1Q9UM00 188 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SMAD6O43541 496 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 DCAF12L1Q5VU92 463 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 NUDT13Q86X67 352 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 KDM8Q8N371 416 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 SDR9C7Q8NEX9 313 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TESCQ96BS2 214 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 APIPQ96GX9 242 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 FBXL20Q96IG2 436 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MGME1Q9BQP7 344 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 CALHM2Q9HA72 323 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TM9SF3Q9HD45 589 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PIP5K1CO60331 668 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 UGT2B11O75310 529 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 CCNFP41002 786 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 P2RY2P41231 377 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 AGFG1P52594 562 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF33BQ06732 778 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ABHD18Q0P651 414 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms