RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 KCNJ3P48549 501 aa15.07■□□□□ 0
RTN3-205ENST00000356000 CHRNA6Q15825 494 aa15.07■□□□□ 0
RTN3-205ENST00000356000 CCDC85BQ15834 202 aaPredicted RBP15.07■□□□□ 0
RTN3-205ENST00000356000 SOWAHAQ2M3V2 549 aa15.07■□□□□ 0
RTN3-205ENST00000356000 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.07■□□□□ 0
RTN3-205ENST00000356000 USP53Q70EK8 1073 aa15.07■□□□□ 0
RTN3-205ENST00000356000 KRT78Q8N1N4 520 aa15.07■□□□□ 0
RTN3-205ENST00000356000 RYBPQ8N488 228 aaPredicted RBP15.07■□□□□ 0
RTN3-205ENST00000356000 OR2T35Q8NGX2 323 aa15.07■□□□□ 0
RTN3-205ENST00000356000 ELP5Q8TE02 316 aa15.07■□□□□ 0
RTN3-205ENST00000356000 GTF3AQ92664 365 aaKnown RBP15.07■□□□□ 0
RTN3-205ENST00000356000 ZDHHC12Q96GR4 267 aa15.07■□□□□ 0
RTN3-205ENST00000356000 PDCD10Q9BUL8 212 aa15.07■□□□□ 0
RTN3-205ENST00000356000 SLC22A11Q9NSA0 550 aa15.07■□□□□ 0
RTN3-205ENST00000356000 HCN2Q9UL51 889 aa15.07■□□□□ 0
RTN3-205ENST00000356000 LRFN2Q9ULH4 789 aa15.07■□□□□ 0
RTN3-205ENST00000356000 BPTFQ12830 3046 aa15.06■□□□□ 0
RTN3-205ENST00000356000 A0A1B0GWJ7 208 aa15.06■□□□□ 0
RTN3-205ENST00000356000 LACTBL1A8MY62 500 aa15.06■□□□□ 0
RTN3-205ENST00000356000 SCAMP1O15126 338 aa15.06■□□□□ 0
RTN3-205ENST00000356000 CLN5O75503 358 aa15.06■□□□□ 0
RTN3-205ENST00000356000 POP7O75817 140 aaKnown RBP15.06■□□□□ 0
RTN3-205ENST00000356000 KDM4BO94953 1096 aa15.06■□□□□ 0
RTN3-205ENST00000356000 PIK3CGP48736 1102 aa15.06■□□□□ 0
RTN3-205ENST00000356000 PUM1Q14671 1186 aaKnown RBP eCLIP15.06■□□□□ 0
RTN3-205ENST00000356000 SPIN4Q56A73 249 aa15.06■□□□□ 0
RTN3-205ENST00000356000 OTOP2Q7RTS6 562 aa15.06■□□□□ 0
RTN3-205ENST00000356000 NKAIN4Q8IVV8 208 aa15.06■□□□□ 0
RTN3-205ENST00000356000 PLA2G15Q8NCC3 412 aa15.06■□□□□ 0
RTN3-205ENST00000356000 OR1S1Q8NH92 325 aa15.06■□□□□ 0
RTN3-205ENST00000356000 CLEC4CQ8WTT0 213 aa15.06■□□□□ 0
RTN3-205ENST00000356000 GLYATL2Q8WU03 294 aa15.06■□□□□ 0
RTN3-205ENST00000356000 SLC35F5Q8WV83 523 aa15.06■□□□□ 0
RTN3-205ENST00000356000 CPPED1Q9BRF8 314 aaPredicted RBP15.06■□□□□ 0
RTN3-205ENST00000356000 TMPRSS4Q9NRS4 437 aa15.06■□□□□ 0
RTN3-205ENST00000356000 NUDT15Q9NV35 164 aa15.06■□□□□ 0
RTN3-205ENST00000356000 IMPAD1Q9NX62 359 aa15.06■□□□□ 0
RTN3-205ENST00000356000 CKMT1AP12532 417 aa15.06■□□□□ 0
RTN3-205ENST00000356000 BTCP35070 178 aa15.06■□□□□ 0
RTN3-205ENST00000356000 STK19P49842 368 aaPredicted RBP15.06■□□□□ 0
RTN3-205ENST00000356000 PSMD4P55036 377 aaKnown RBP15.06■□□□□ 0
RTN3-205ENST00000356000 DHODHQ02127 395 aa15.06■□□□□ 0
RTN3-205ENST00000356000 TAF1AQ15573 450 aaPredicted RBP15.06■□□□□ 0
RTN3-205ENST00000356000 TSNQ15631 228 aaKnown RBP15.06■□□□□ 0
RTN3-205ENST00000356000 MSANTD2Q6P1R3 559 aa15.06■□□□□ 0
RTN3-205ENST00000356000 FUT10Q6P4F1 479 aa15.06■□□□□ 0
RTN3-205ENST00000356000 AFTPHQ6ULP2 937 aa15.06■□□□□ 0
RTN3-205ENST00000356000 OR9Q1Q8NGQ5 310 aa15.06■□□□□ 0
RTN3-205ENST00000356000 C11orf24Q96F05 449 aaPredicted RBP15.06■□□□□ 0
RTN3-205ENST00000356000 CPEB1Q9BZB8 566 aaKnown RBP15.06■□□□□ 0
RTN3-205ENST00000356000 NXF3Q9H4D5 531 aaKnown RBP15.06■□□□□ 0
RTN3-205ENST00000356000 RNF19AQ9NV58 838 aa15.06■□□□□ 0
RTN3-205ENST00000356000 SEC14L3Q9UDX4 400 aa15.06■□□□□ 0
RTN3-205ENST00000356000 TEX13CA0A0J9YWL9 993 aa15.05■□□□□ 0
RTN3-205ENST00000356000 LOC285095A0A1B0GVY8 99 aa15.05■□□□□ 0
RTN3-205ENST00000356000 TEX46H3BTG2 121 aa15.05■□□□□ 0
RTN3-205ENST00000356000 HAS3O00219 553 aa15.05■□□□□ 0
RTN3-205ENST00000356000 SULT1C2O00338 296 aa15.05■□□□□ 0
RTN3-205ENST00000356000 ADAM12O43184 909 aa15.05■□□□□ 0
RTN3-205ENST00000356000 CACNG3O60359 315 aa15.05■□□□□ 0
RTN3-205ENST00000356000 FBP1P09467 338 aa15.05■□□□□ 0
RTN3-205ENST00000356000 ENGP17813 658 aa15.05■□□□□ 0
RTN3-205ENST00000356000 ARL2P36404 184 aa15.05■□□□□ 0
RTN3-205ENST00000356000 P2RY4P51582 365 aa15.05■□□□□ 0
RTN3-205ENST00000356000 SNX16P57768 344 aa15.05■□□□□ 0
RTN3-205ENST00000356000 TSPAN5P62079 268 aa15.05■□□□□ 0
RTN3-205ENST00000356000 NRG1Q02297 640 aaPredicted RBP15.05■□□□□ 0
RTN3-205ENST00000356000 TRAM2Q15035 370 aa15.05■□□□□ 0
RTN3-205ENST00000356000 HECTD3Q5T447 861 aa15.05■□□□□ 0
RTN3-205ENST00000356000 C22orf42Q6IC83 251 aa15.05■□□□□ 0
RTN3-205ENST00000356000 SWSAP1Q6NVH7 229 aa15.05■□□□□ 0
RTN3-205ENST00000356000 IL17RCQ8NAC3 791 aa15.05■□□□□ 0
RTN3-205ENST00000356000 GPR156Q8NFN8 814 aa15.05■□□□□ 0
RTN3-205ENST00000356000 ZDHHC1Q8WTX9 485 aa15.05■□□□□ 0
RTN3-205ENST00000356000 MS4A3Q96HJ5 214 aa15.05■□□□□ 0
RTN3-205ENST00000356000 CMSS1Q9BQ75 279 aaKnown RBP15.05■□□□□ 0
RTN3-205ENST00000356000 BTBD1Q9H0C5 482 aa15.05■□□□□ 0
RTN3-205ENST00000356000 ANKRD19PQ9H560 264 aa15.05■□□□□ 0
RTN3-205ENST00000356000 LOC105369274A0A096LPK9 316 aa15.05■□□□□ -0
RTN3-205ENST00000356000 C17orf113A0A1B0GUU1 675 aa15.05■□□□□ -0
RTN3-205ENST00000356000 ARGFXA6NJG6 315 aa15.05■□□□□ -0
RTN3-205ENST00000356000 ANXA2P2A6NMY6 339 aa15.05■□□□□ -0
RTN3-205ENST00000356000 M0R129 80 aa15.05■□□□□ -0
RTN3-205ENST00000356000 KPNA3O00505 521 aaPredicted RBP15.05■□□□□ -0
RTN3-205ENST00000356000 OR1I1O60431 355 aa15.05■□□□□ -0
RTN3-205ENST00000356000 BDKRB1P46663 353 aa15.05■□□□□ -0
RTN3-205ENST00000356000 UGT8Q16880 541 aa15.05■□□□□ -0
RTN3-205ENST00000356000 SLC39A12Q504Y0 691 aa15.05■□□□□ -0
RTN3-205ENST00000356000 ANKRD39Q53RE8 183 aa15.05■□□□□ -0
RTN3-205ENST00000356000 TCTE1Q5JU00 501 aa15.05■□□□□ -0
RTN3-205ENST00000356000 B3GNTL1Q67FW5 361 aaPredicted RBP15.05■□□□□ -0
RTN3-205ENST00000356000 VTCN1Q7Z7D3 282 aa15.05■□□□□ -0
RTN3-205ENST00000356000 C11orf96Q7Z7L8 435 aa15.05■□□□□ -0
RTN3-205ENST00000356000 OR4N4Q8N0Y3 316 aa15.05■□□□□ -0
RTN3-205ENST00000356000 KCNJ9Q92806 393 aa15.05■□□□□ -0
RTN3-205ENST00000356000 OTULINQ96BN8 352 aa15.05■□□□□ -0
RTN3-205ENST00000356000 BBS4Q96RK4 519 aa15.05■□□□□ -0
RTN3-205ENST00000356000 DDX31Q9H8H2 851 aaKnown RBP15.05■□□□□ -0
RTN3-205ENST00000356000 POLR3HQ9Y535 204 aaPredicted RBP15.05■□□□□ -0
RTN3-205ENST00000356000 SIGLEC5O15389 551 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms