RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 REEP4Q9H6H4 257 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 ZNF304Q9HCX3 659 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 FOXJ2Q9P0K8 574 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 ATP6V1HQ9UI12 483 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 PCDHA9Q9Y5H5 950 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 CCDC88CQ9P219 2028 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 NUP210LQ5VU65 1888 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 NR5A2O00482 541 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 JRKO75564 520 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 CAPN3P20807 821 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 PRPS1L1P21108 318 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 CPN2P22792 545 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 ALDH9A1P49189 494 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 POLR2JP52435 117 aaKnown RBP17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 RAB15P59190 212 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 IRX1P78414 480 aaPredicted RBP17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 PDE7AQ13946 482 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 MPEG1Q2M385 716 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 SPANXN4Q5MJ08 99 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM180BQ6P0A1 224 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 PRMT9Q6P2P2 845 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 BLOC1S3Q6QNY0 202 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 IKBIPQ70UQ0 350 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 TICAM1Q8IUC6 712 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 OR51Q1Q8NH59 317 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 COL26A1Q96A83 441 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 DDA1Q9BW61 102 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 PHF11Q9UIL8 331 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 CES1P1Q9UKY3 287 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 CDC14AQ9UNH5 594 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 SDK2Q58EX2 2172 aa17.92■□□□□ 0.46
CHMP4A-201ENST00000347519 A0A1W2PS29 197 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM234BA2RU67 622 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 ASPDHA6ND91 283 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 PRMT3O60678 531 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 CPNE3O75131 537 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 UBOX5O94941 541 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 NR2F6P10588 404 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 LAMP1P11279 417 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 DDCP20711 480 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 FBLP22087 321 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 ADSLP30566 484 aaPredicted RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 GSTM5P46439 218 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 WNT3P56703 355 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 FOXL2P58012 376 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 DSG2Q14126 1118 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 ARHGAP40Q5TG30 622 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 SNX32Q86XE0 403 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 DSELQ8IZU8 1212 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 ULBP3Q9BZM4 244 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 SPRY4Q9C004 299 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 WBP11Q9Y2W2 641 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 PCDHGA3Q9Y5H0 932 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 LOC100653049A0A140TA62 436 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 OR2W5A6NFC9 320 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 MEN1O00255 615 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 SLC22A2O15244 555 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 KRT34O76011 436 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 TNFSF15O95150 251 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 HBQ1P09105 142 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 RNH1P13489 461 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 COX7A2P14406 83 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 EFNA1P20827 205 aaPredicted RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 HPCAL1P37235 193 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 EFNA3P52797 238 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 CLNS1AP54105 237 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 SKP1P63208 163 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 RCAN2Q14206 197 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 PGS1Q32NB8 556 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM174BQ3ZCQ3 159 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 NKAIN1Q4KMZ8 207 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 NIPAL1Q6NVV3 410 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 TIPARPQ7Z3E1 657 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM9CQ8IZT9 166 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 GALNT15Q8N3T1 639 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 GALNT6Q8NCL4 622 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 VPS33AQ96AX1 596 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 TESCQ96BS2 214 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 COQ8BQ96D53 544 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 ZBTB18Q99592 522 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 YIPF2Q9BWQ6 316 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 CLK4Q9HAZ1 481 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 CTSFQ9UBX1 484 aa17.91■□□□□ 0.46
CHMP4A-201ENST00000347519 CNOT3O75175 753 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 GUCY1B2O75343 617 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 STK17BO94768 372 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 CBX6O95503 412 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 DLGAP3O95886 979 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 ONECUT2O95948 504 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 T-ENOLP0DO92 83 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 COX4I1P13073 169 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 DRD2P14416 443 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 XCR1P46094 333 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 GABREP78334 506 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 DCDP81605 110 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 DUSP2Q05923 314 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 KRT72Q14CN4 511 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 HEPACAMQ14CZ8 416 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 ZNF750Q32MQ0 723 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 VPS26BQ4G0F5 336 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms