RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SLAMF7Q9NQ25 335 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 SLC35C2Q9NQQ7 365 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 NLGN3Q9NZ94 848 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 C5AR2Q9P296 337 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 AURKCQ9UQB9 309 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 GOLGA4Q13439 2230 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 TLCD2A6NGC4 264 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 TXNDC9O14530 226 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 HNRNPRO43390 633 aaKnown RBP20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 KCNK5O95279 499 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 KRT75O95678 551 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 C1QCP02747 245 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 ALDH4A1P30038 563 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 HOXD12P35452 270 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 SOAT1P35610 550 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 GPR3P46089 330 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 RGNQ15493 299 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 TRIP10Q15642 601 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 DEFB134Q4QY38 66 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 TBCELQ5QJ74 424 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 MCATQ8IVS2 390 aaKnown RBP20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 ZZZ3Q8IYH5 903 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 CLEC4FQ8N1N0 589 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 DNAJC22Q8N4W6 341 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 OR52N2Q8NGI0 321 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 UCN3Q969E3 161 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 FAM162AQ96A26 154 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 TGM7Q96PF1 710 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 MAPKAP1Q9BPZ7 522 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 DUSP23Q9BVJ7 150 aa20.33■□□□□ 0.84
TSPAN3-202ENST00000346495 SRPX2O60687 465 aaPredicted RBP20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 CREG1O75629 220 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 NTRK1P04629 796 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 NTSP30990 170 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 CHI3L1P36222 383 aaPredicted RBP20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 BUD31P41223 144 aaPredicted RBP20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 VMACQ2NL98 169 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 C18orf63Q68DL7 685 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 FAM180BQ6P0A1 224 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 SLC48A1Q6P1K1 146 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 RABEPKQ7Z6M1 372 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 LILRA2Q8N149 483 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 ZFP28Q8NHY6 868 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 NCSTNQ92542 709 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 NCLNQ969V3 563 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 TRIM4Q9C037 500 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 CHST8Q9H2A9 424 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 CXorf36Q9H7Y0 433 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 MS4A12Q9NXJ0 267 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 C15orf41Q9Y2V0 281 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 SLC22A7Q9Y694 548 aa20.32■□□□□ 0.84
TSPAN3-202ENST00000346495 PGRMC2O15173 223 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 YKT6O15498 198 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 RETP07949 1114 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 NR2F6P10588 404 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 ALPPL2P10696 532 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 IL1RNP18510 177 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 NR1D2Q14995 579 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 ANGPTL8Q6UXH0 198 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 KANSL1Q7Z3B3 1105 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 PAPD5Q8NDF8 572 aaKnown RBP20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 BBS4Q96RK4 519 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 CHRNA10Q9GZZ6 450 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 PSME2Q9UL46 239 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 ENTPD4Q9Y227 616 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 IGHV1OR21-1A0A087WYE8 117 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 GLOD5A6NK44 160 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 PRKRAO75569 313 aaKnown RBP20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 CPN2P22792 545 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 GFERP55789 205 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 OR1D5P58170 312 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 GPLD1P80108 840 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 TNFRSF17Q02223 184 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 VAC14Q08AM6 782 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 FADDQ13158 208 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 DEFB110Q30KQ9 67 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 HLA-BQ31612 363 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 OGFRL1Q5TC84 451 aaPredicted RBP20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 LPCAT4Q643R3 524 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 PTOV1Q86YD1 416 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 CARFQ8N187 725 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 TMEM102Q8N9M5 508 aaPredicted RBP20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 PSMA8Q8TAA3 256 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 CEP76Q8TAP6 659 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 LRTOMTQ8WZ04 291 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 KLHL4Q9C0H6 718 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 LYRM4Q9HD34 91 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 PRDM9Q9NQV7 894 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 GIMAP4Q9NUV9 329 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 DNAAF2Q9NVR5 837 aaKnown RBP20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 ZSCAN32Q9NX65 697 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 KCMF1Q9P0J7 381 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 CES1P1Q9UKY3 287 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 SNX8Q9Y5X2 465 aa20.31■□□□□ 0.84
TSPAN3-202ENST00000346495 SCN3AQ9NY46 2000 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 RNF103-CHMP3A0A140T963 221 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 MYO1GB0I1T2 1018 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 DUX1O43812 170 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 KIF1CO43896 1103 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms