RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 FRMD7Q6ZUT3 714 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 ANKRD37Q7Z713 158 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 KIRREL3Q8IZU9 778 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 NACC2Q96BF6 587 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 PHF21BQ96EK2 531 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 PTCD3Q96EY7 689 aaKnown RBP15.12■□□□□ 0.01
RAB5C-201ENST00000346213 QRFPRQ96P65 431 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 NPAS2Q99743 824 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 AIF1LQ9BQI0 150 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 CCDC106Q9BWC9 280 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 CD244Q9BZW8 370 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 ZNF700Q9H0M5 742 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 GSTO2Q9H4Y5 243 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 EML4Q9HC35 981 aaKnown RBP15.12■□□□□ 0.01
RAB5C-201ENST00000346213 ANKHQ9HCJ1 492 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 A0A1B0GTL3 188 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 PABPN1LA6NDY0 278 aaKnown RBP15.12■□□□□ 0.01
RAB5C-201ENST00000346213 SUPT3HB4E1H0 165 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 SUPT3HO75486 399 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 SEC24DO94855 1032 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-201ENST00000346213 SIX3O95343 332 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-201ENST00000346213 GNAZP19086 355 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 GRK3P35626 688 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 BTG2P78543 158 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 MINDY4Q4G0A6 757 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 UNC50Q53HI1 259 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 METTL21CQ5VZV1 264 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 IGFL3Q6UXB1 125 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 RPS27LQ71UM5 84 aaKnown RBP15.12■□□□□ 0.01
RAB5C-201ENST00000346213 SIRT6Q8N6T7 355 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 SNX31Q8N9S9 440 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 BRIX1Q8TDN6 353 aaKnown RBP15.12■□□□□ 0.01
RAB5C-201ENST00000346213 MS4A6EQ96DS6 147 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 NUDT4Q9NZJ9 180 aa15.12■□□□□ 0.01
RAB5C-201ENST00000346213 SHANK1Q9Y566 2161 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 SYCE1LA8MT33 242 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 KLK8O60259 260 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 DIAPH2O60879 1101 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 WFS1O76024 890 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 F10P00742 488 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 CALB2P22676 271 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 ALDH18A1P54886 795 aaKnown RBP15.11■□□□□ 0.01
RAB5C-201ENST00000346213 HERVK_113P63132 956 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 KCNJ2P63252 427 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 ADPRMQ3LIE5 342 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 SLC9B1Q4ZJI4 515 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 CDKL4Q5MAI5 379 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 TMIGD1Q6UXZ0 262 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 ZNF793Q6ZN11 406 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 CA13Q8N1Q1 262 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 CATSPER1Q8NEC5 780 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 ERVK-6Q9BXR3 956 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 ARMCX1Q9P291 453 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 TMCO1Q9UM00 188 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 TRIM33Q9UPN9 1127 aa15.11■□□□□ 0.01
RAB5C-201ENST00000346213 NSG1A0A0A6YYJ2 146 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 LRIT2A6NDA9 550 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 SH3BGRLO75368 114 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 IGHEP01854 428 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 C8orf89P0DMQ9 161 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 MAOAP21397 527 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 NAA20P61599 178 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 SRSF11Q05519 484 aaKnown RBP15.1■□□□□ 0.01
RAB5C-201ENST00000346213 XKR6Q5GH73 641 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 LINC00696Q6ZRV3 163 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 NDUFAF7Q7L592 441 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 TREML1Q86YW5 311 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 PTGR2Q8N8N7 351 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-201ENST00000346213 AGR3Q8TD06 166 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 FAR2Q96K12 515 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 NSUN5Q96P11 429 aaKnown RBP15.1■□□□□ 0.01
RAB5C-201ENST00000346213 CSF3RQ99062 836 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 CCDC28BQ9BUN5 200 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 LHPPQ9H008 270 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 NECTIN3Q9NQS3 549 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 PLA2G3Q9NZ20 509 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 GPRC5BQ9NZH0 403 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 PCDHGB7Q9Y5F8 929 aa15.1■□□□□ 0.01
RAB5C-201ENST00000346213 UTP20O75691 2785 aaKnown RBP15.1■□□□□ 0.01
RAB5C-201ENST00000346213 RTCAO00442 366 aaKnown RBP15.09■□□□□ 0.01
RAB5C-201ENST00000346213 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
RAB5C-201ENST00000346213 PPP2R1BP30154 601 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 CHIT1Q13231 466 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 HERC3Q15034 1050 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 PFKFB4Q16877 469 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 MFSD4BQ5TF39 518 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 FCRLBQ6BAA4 426 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 Q6ZS92 163 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 LRRC70Q7Z2Q7 622 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 TCAIMQ8N3R3 496 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 PNPLA2Q96AD5 504 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 RAB3IPQ96QF0 476 aaPredicted RBP15.09■□□□□ 0.01
RAB5C-201ENST00000346213 F2RL3Q96RI0 385 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 SORBS1Q9BX66 1292 aaKnown RBP15.09■□□□□ 0.01
RAB5C-201ENST00000346213 SHCBP1LQ9BZQ2 653 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 TCF7L2Q9NQB0 619 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 PTGFRNQ9P2B2 879 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 USP9XQ93008 2570 aaPredicted RBP15.09■□□□□ 0.01
RAB5C-201ENST00000346213 IGKV3D-11A0A0A0MRZ8 115 aa15.09■□□□□ 0.01
RAB5C-201ENST00000346213 CYSRT1A8MQ03 144 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms