RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PET100P0DJ07 73 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 MAPK3P27361 379 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-202ENST00000345356 CLCNKBP51801 687 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ILF3Q12906 894 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL12A1-202ENST00000345356 EIF4HQ15056 248 aaKnown RBP11.65□□□□□ -0.54
COL12A1-202ENST00000345356 STK11Q15831 433 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF691Q5VV52 312 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 MBOAT1Q6ZNC8 495 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ARL11Q969Q4 196 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 CLCC1Q96S66 551 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 CTRCQ99895 268 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 P2RY13Q9BPV8 354 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 TRMT61BQ9BVS5 477 aaKnown RBP11.65□□□□□ -0.54
COL12A1-202ENST00000345356 SDR39U1Q9NRG7 319 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-202ENST00000345356 FBXO10Q9UK96 956 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ASB4Q9Y574 426 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 SPATA31A5Q5VU36 1347 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 SPATA31A7Q8IWB4 1347 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 A0A1B0GVM2 712 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF670-ZNF695F2Z2N8 137 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 NRIP1P48552 1158 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 RGS6P49758 472 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 SEMG2Q02383 582 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ABRAXAS2Q15018 415 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 OXA1LQ15070 435 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 SSX2Q16385 188 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 PTCHD3Q3KNS1 767 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ESX1Q8N693 406 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ARRDC4Q8NCT1 418 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 OR10G6Q8NH81 332 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 SCAMP5Q8TAC9 235 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 RIPOR3Q96MK2 946 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 UBXN7O94888 489 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 KAT7O95251 611 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 IFNA17P01571 189 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF823P16415 610 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 CCND3P30281 292 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-202ENST00000345356 PITPNBP48739 271 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 DEFA6Q01524 100 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF529Q6P280 563 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 OR2L8Q8NGY9 312 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 PCDHGB2Q9Y5G2 931 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 CHD1O14646 1710 aa11.65□□□□□ -0.54
COL12A1-202ENST00000345356 OAZ2O95190 189 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 RENP00797 406 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 JUNP05412 331 aaKnown RBP11.65□□□□□ -0.55
COL12A1-202ENST00000345356 EIF2DP41214 584 aaKnown RBP11.65□□□□□ -0.55
COL12A1-202ENST00000345356 TAS2R50P59544 299 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 NKAPLQ5M9Q1 402 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 NOXRED1Q6NXP6 359 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 LYSMD2Q8IV50 215 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 GID4Q8IVV7 300 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 ADAMTS19Q8TE59 1207 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 RAB8BQ92930 207 aa11.65□□□□□ -0.55
COL12A1-202ENST00000345356 PTNP21246 168 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ACVR1BP36896 505 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 CDKN2DP55273 166 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 RACK1P63244 317 aaKnown RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 SREBF2Q12772 1141 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 METTL11BQ5VVY1 283 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 WDTC1Q8N5D0 677 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 OTUB2Q96DC9 234 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF778Q96MU6 729 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ACBD6Q9BR61 282 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 EFCAB11Q9BUY7 163 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 C1QTNF7Q9BXJ2 289 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 PRDM9Q9NQV7 894 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 A0A1B0GVT2 93 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF878C9JN71 531 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 SC5DO75845 299 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 SOX2P48431 317 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 C1orf220Q5T0J3 134 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 FAM205BPQ63HN1 556 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 TMEM220Q6QAJ8 160 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 PHYKPLQ8IUZ5 450 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 CLDN19Q8N6F1 224 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 CCDC86Q9H6F5 360 aaKnown RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 WASH6PQ9NQA3 447 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 PCDHB11Q9Y5F2 797 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 TEX13DA0A0J9YY54 714 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ADM5C9JUS6 153 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 TGM6O95932 706 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 CDK1P06493 297 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 HTR1AP08908 422 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 TFPIP10646 304 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 GPX3P22352 226 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 C21orf33P30042 268 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 GFOD2Q3B7J2 385 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 THOC6Q86W42 341 aaKnown RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF101Q8IZC7 436 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 POTEKPQ9BYX7 375 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 OR6C2Q9NZP2 312 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 GTF2IRD1Q9UHL9 959 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 RPH3AQ9Y2J0 694 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 DUXAA6NLW8 204 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ACADMP11310 421 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 BMP8BP34820 402 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF252P-AS1Q0IIN9 211 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 TRAM2Q15035 370 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms