RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 HIST1H1TP22492 207 aaPredicted RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 CNTFP26441 200 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 GPR143P51810 404 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 RPS13P62277 151 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 TGM3Q08188 693 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 SLC13A2Q13183 592 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 TMEM35AQ53FP2 167 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 FAM219BQ5XKK7 198 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 SPINK14Q6IE38 97 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 CHSY3Q70JA7 882 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 RPS27LQ71UM5 84 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 TRMT10CQ7L0Y3 403 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 RPS19BP1Q86WX3 136 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 SLC5A8Q8N695 610 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 L3MBTL4Q8NA19 623 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 SRFBP1Q8NEF9 429 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 ARMC2Q8NEN0 867 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 OR52B6Q8NGF0 335 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 WDR20Q8TBZ3 569 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 ADAMTS18Q8TE60 1221 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 CMTM7Q96FZ5 175 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 CDK15Q96Q40 435 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF717Q9BY31 904 aaPredicted RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 NOL11Q9H8H0 719 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 LYRM4Q9HD34 91 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 PCTPQ9UKL6 214 aa13.47□□□□□ -0.25
HMGN3-202ENST00000344726 PPIEQ9UNP9 301 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 TNPO3Q9Y5L0 923 aaKnown RBP13.47□□□□□ -0.25
HMGN3-202ENST00000344726 A0A1B0GTL3 188 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 CLDN4O14493 209 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 PLPP1O14494 284 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 PRKNO60260 465 aaPredicted RBP13.46□□□□□ -0.25
HMGN3-202ENST00000344726 UGDHO60701 494 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 CTNSO60931 367 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 LDB3O75112 727 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 NEURL1O76050 574 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 RASAL1O95294 804 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 STSP08842 583 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 SNRPAP09012 282 aaKnown RBP13.46□□□□□ -0.25
HMGN3-202ENST00000344726 NUDT7P0C024 238 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 SERPINB1P30740 379 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 PIK3CBP42338 1070 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 SSR2P43308 183 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 PIK3CGP48736 1102 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 NEK2P51955 445 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 MLF1P58340 268 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 TAS2R50P59544 299 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 TERF2Q15554 542 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 OR1C1Q15619 314 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 TSNAXIP1Q2TAA8 658 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 AP5B1Q2VPB7 878 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 C1QL3Q5VWW1 255 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF787Q6DD87 383 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 OR4C11Q6IEV9 310 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 METTL2BQ6P1Q9 378 aaKnown RBP13.46□□□□□ -0.25
HMGN3-202ENST00000344726 MAMDC2Q7Z304 686 aaPredicted RBP13.46□□□□□ -0.25
HMGN3-202ENST00000344726 ZNF227Q86WZ6 799 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 LGI4Q8N135 537 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 ARMC10Q8N2F6 343 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 B3GNT7Q8NFL0 401 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 SCMH1Q96GD3 660 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 UTP23Q9BRU9 249 aaKnown RBP13.46□□□□□ -0.25
HMGN3-202ENST00000344726 ROGDIQ9GZN7 287 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 PRM3Q9NNZ6 103 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 KLHL1Q9NR64 748 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 ABI3Q9P2A4 366 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 ADGRE2Q9UHX3 823 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 FBXW2Q9UKT8 454 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
HMGN3-202ENST00000344726 PCDHGA11Q9Y5H2 935 aa13.46□□□□□ -0.25
HMGN3-202ENST00000344726 TEX15Q9BXT5 2789 aa13.46□□□□□ -0.26
HMGN3-202ENST00000344726 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 TRBV11-1A0A0K0K1C0 115 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 STX16-NPEPL1H3BU86 382 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 PPP6CO00743 305 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 STX16O14662 325 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 ID2Q02363 134 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 TRAF3Q13114 568 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 SLC29A2Q14542 456 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
HMGN3-202ENST00000344726 TIFABQ6ZNK6 161 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 SUN3Q8TAQ9 357 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 THAP3Q8WTV1 239 aaPredicted RBP13.45□□□□□ -0.26
HMGN3-202ENST00000344726 PTPMT1Q8WUK0 201 aaPredicted RBP13.45□□□□□ -0.26
HMGN3-202ENST00000344726 NCLNQ969V3 563 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 RGMAQ96B86 450 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 ANKRD9Q96BM1 317 aaPredicted RBP13.45□□□□□ -0.26
HMGN3-202ENST00000344726 MRPL57Q9BQC6 102 aaKnown RBP13.45□□□□□ -0.26
HMGN3-202ENST00000344726 ALOXE3Q9BYJ1 711 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
HMGN3-202ENST00000344726 L2HGDHQ9H9P8 463 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 ADAP2Q9NPF8 381 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 PCDHGB6Q9Y5F9 930 aa13.45□□□□□ -0.26
HMGN3-202ENST00000344726 ZNF407Q9C0G0 2248 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 TMEM200CA6NKL6 621 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms