RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 QRFPRQ96P65 431 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 KCNC2Q96PR1 638 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 TRIM8Q9BZR9 551 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 PHACTR1Q9C0D0 580 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ENKD1Q9H0I2 346 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ACOT9Q9Y305 439 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 CLCA3PQ9Y6N3 262 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 SPACA6W5XKT8 324 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 A0A087X1B8 175 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 SYCE1LA8MT33 242 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 SAP18O00422 153 aaKnown RBP11.57□□□□□ -0.56
SGCA-202ENST00000344627 KERAO60938 352 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 C1QAP02745 245 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 GFAPP14136 432 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 CD22P20273 847 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 HSD17B7P56937 341 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 GUCY2DQ02846 1103 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 FAM83EQ2M2I3 478 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 AP5B1Q2VPB7 878 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 KLC3Q6P597 504 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 RGS9BPQ6ZS82 235 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 CHSY3Q70JA7 882 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 SCUBE1Q8IWY4 988 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 TMEM132CQ8N3T6 1108 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 CPSF7Q8N684 471 aaKnown RBP11.57□□□□□ -0.56
SGCA-202ENST00000344627 TEX9Q8N6V9 391 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 ACBD4Q8NC06 268 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 C16orf52Q8NHV5 167 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 CA5BP1Q8WTZ4 195 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 KCTD4Q8WVF5 259 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 C16orf45Q96MC5 204 aaPredicted RBP11.57□□□□□ -0.56
SGCA-202ENST00000344627 CSF3RQ99062 836 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 LRRC1Q9BTT6 524 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 ALOXE3Q9BYJ1 711 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 ROGDIQ9GZN7 287 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 LIN28AQ9H9Z2 209 aaKnown RBP11.57□□□□□ -0.56
SGCA-202ENST00000344627 ADAP2Q9NPF8 381 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 TINAGQ9UJW2 476 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 DAPP1Q9UN19 280 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 ERVK-11Q9UQG0 969 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 ASB1Q9Y576 335 aa11.57□□□□□ -0.56
SGCA-202ENST00000344627 TGFBR3LH3BV60 316 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 RTCAO00442 366 aaKnown RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 ZNHIT1O43257 154 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 CTNSO60931 367 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 ITGA10O75578 1167 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 ZFAND5O76080 213 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 TBX6O95947 436 aaPredicted RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 EPB42P16452 691 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 POU3F2P20265 443 aaPredicted RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 ATP5A1P25705 553 aaKnown RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 PHBP35232 272 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 ARL1P40616 181 aaPredicted RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 RFC3P40938 356 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 SSR2P43308 183 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 MEOX1P50221 254 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 IRF9Q00978 393 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 ID2Q02363 134 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 TBCCQ15814 346 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 PFKFB4Q16877 469 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 ADPRMQ3LIE5 342 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 DOLPP1Q86YN1 238 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 CYP4Z2PQ8N1L4 340 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 ACOT4Q8N9L9 421 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 APCDD1LQ8NCL9 501 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 DAZLQ92904 295 aaKnown RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 WDR34Q96EX3 536 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 CMTM7Q96FZ5 175 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 ATOH8Q96SQ7 321 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 MAPKAP1Q9BPZ7 522 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 TREX2Q9BQ50 279 aaPredicted RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 CENPKQ9BS16 269 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 TBCDQ9BTW9 1192 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 OR8D2Q9GZM6 311 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 VPS11Q9H270 941 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 OR51B5Q9H339 312 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 LYRM4Q9HD34 91 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 PRDM7Q9NQW5 492 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 CPSF2Q9P2I0 782 aaKnown RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 MTRF1LQ9UGC7 380 aaKnown RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 PPIEQ9UNP9 301 aaKnown RBP11.56□□□□□ -0.56
SGCA-202ENST00000344627 EML6Q6ZMW3 1958 aa11.56□□□□□ -0.56
SGCA-202ENST00000344627 A0A096LPK6 155 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 CYR61O00622 381 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 TFECO14948 347 aaPredicted RBP11.55□□□□□ -0.56
SGCA-202ENST00000344627 PEX1O43933 1283 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 CDC40O60508 579 aaKnown RBP eCLIP11.55□□□□□ -0.56
SGCA-202ENST00000344627 LDB3O75112 727 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 C2P06681 752 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 EPORP19235 508 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 CPN2P22792 545 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 TYK2P29597 1187 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 PTGS2P35354 604 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 CASP2P42575 452 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 SSR4P51571 173 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 HSF1Q00613 529 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 ELAVL1Q15717 326 aaKnown RBP11.55□□□□□ -0.56
SGCA-202ENST00000344627 TMEM35AQ53FP2 167 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 ARHGAP11AQ6P4F7 1023 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms