RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RPL3P39023 403 aaKnown RBP12.86□□□□□ -0.35
CDC42-202ENST00000344548 FRKP42685 505 aaPredicted RBP12.86□□□□□ -0.35
CDC42-202ENST00000344548 MANFP55145 182 aaKnown RBP12.86□□□□□ -0.35
CDC42-202ENST00000344548 OLR1P78380 273 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 FOLH1Q04609 750 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 ELOCQ15369 112 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 DEFB134Q4QY38 66 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 TRIM40Q6P9F5 258 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 VTCN1Q7Z7D3 282 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 CBR4Q8N4T8 237 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 FAM174AQ8TBP5 190 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 CNRIP1Q96F85 164 aaPredicted RBP12.86□□□□□ -0.35
CDC42-202ENST00000344548 SPACA7Q96KW9 195 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 ANKRA2Q9H9E1 313 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 ZNF860A6NHJ4 632 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 PDPK1O15530 556 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 AQP9O43315 295 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 TBX19O60806 448 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 NME6O75414 186 aaPredicted RBP12.86□□□□□ -0.35
CDC42-202ENST00000344548 RETP07949 1114 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 SMIM10L1P0DMW3 83 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 UQCRBP14927 111 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 KDELR2P33947 212 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 RUNX2Q13950 521 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 ANKRD34AQ69YU3 496 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 TMEM214Q6NUQ4 689 aaKnown RBP12.86□□□□□ -0.35
CDC42-202ENST00000344548 OR52E4Q8NGH9 312 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 NT5CQ8TCD5 201 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 CENPNQ96H22 339 aaPredicted RBP12.86□□□□□ -0.35
CDC42-202ENST00000344548 SMIM10Q96HG1 83 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 ZFYVE21Q9BQ24 234 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 ASPSCR1Q9BZE9 553 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 GLIPR2Q9H4G4 154 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 CES1P1Q9UKY3 287 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 ENTPD2Q9Y5L3 495 aa12.86□□□□□ -0.35
CDC42-202ENST00000344548 TP53BP1Q12888 1972 aaPredicted RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 A0A0J9YY10 115 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 FAM221BA6H8Z2 402 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 PROM1O43490 865 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 ERAL1O75616 437 aaKnown RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 RAP2AP10114 183 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 FASLGP48023 281 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 BNC1Q01954 994 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 ATP6AP1Q15904 470 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 ZBTB49Q6ZSB9 765 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 C17orf82Q86X59 251 aaPredicted RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 ZCCHC7Q8N3Z6 543 aaKnown RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 SLC25A45Q8N413 288 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 AVL9Q8NBF6 648 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 TNIP2Q8NFZ5 429 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 OR52N2Q8NGI0 321 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 SUN3Q8TAQ9 357 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 SLC47A1Q96FL8 570 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 CSF3RQ99062 836 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 VCX3BQ9H321 246 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 SERHL2Q9H4I8 314 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 FSCN3Q9NQT6 498 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 TAS2R7Q9NYW3 318 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 ANKMY1Q9P2S6 941 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 POMT2Q9UKY4 750 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 AP3M1Q9Y2T2 418 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 RNF103-CHMP3A0A140T963 221 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 VILLO15195 856 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 BCAT2O15382 392 aaPredicted RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 GMNNO75496 209 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 PIAS2O75928 621 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 UBXN7O94888 489 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 ZNF682O95780 498 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 OPN1SWP03999 348 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 GIMD1P0DJR0 217 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 GSTM2P28161 218 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 FEN1P39748 380 aaKnown RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 STXBP1P61764 594 aaKnown RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 TRA2BP62995 288 aaKnown RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 ZXDAP98168 799 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 NKAIN2Q5VXU1 208 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 HS3ST5Q8IZT8 346 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 TBC1D19Q8N5T2 526 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 OR5P2Q8WZ92 322 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 N4BP2L2Q92802 583 aaPredicted RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 GAL3ST3Q96A11 431 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 AMDHD1Q96NU7 426 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 MAP3K3Q99759 626 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 SLC35C2Q9NQQ7 365 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 UBAP1Q9NZ09 502 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 KCMF1Q9P0J7 381 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
CDC42-202ENST00000344548 KLK4Q9Y5K2 254 aa12.85□□□□□ -0.35
CDC42-202ENST00000344548 CACNA1EQ15878 2313 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 SLC9B1P1A6NJY1 282 aa12.84□□□□□ -0.35
CDC42-202ENST00000344548 TXNDC9O14530 226 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms